Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC097713.2-201ENST00000430199 356 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 AL132765.1-201ENST00000434165 553 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 RHOT1P3-201ENST00000436571 331 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 AC096775.1-201ENST00000437724 448 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 Z95327.1-201ENST00000446082 482 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 MTND4LP30-201ENST00000454092 297 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 CYCSP34-201ENST00000458172 304 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC6.55□□□□□ -1.36
HLA-CQ95604 AC006511.1-201ENST00000470614 315 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 FO393415.2-201ENST00000480085 343 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-CQ95604 AC026826.1-201ENST00000493002 361 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 HMGB1P21-201ENST00000502313 581 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 RNU6-120P-201ENST00000516077 103 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 OR10G5P-201ENST00000532733 358 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 HSPE1P20-201ENST00000538133 289 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 AL591767.3-201ENST00000554632 525 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.55□□□□□ -1.36
HLA-CQ95604 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
HLA-CQ95604 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 NANOGP3-201ENST00000605855 286 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 FTX_2.1-201ENST00000618816 94 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-CQ95604 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-CQ95604 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HLA-CQ95604 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-CQ95604 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 AC018628.1-201ENST00000624147 3819 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-CQ95604 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-CQ95604 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.54□□□□□ -1.36
HLA-CQ95604 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.54□□□□□ -1.36
HLA-CQ95604 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
HLA-CQ95604 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HLA-CQ95604 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 AL031119.1-201ENST00000404707 1879 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HLA-CQ95604 Y_RNA.314-201ENST00000365114 102 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 RPL35AP31-201ENST00000418340 337 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 MTND5P15-201ENST00000434246 349 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 AC073410.1-201ENST00000435125 589 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-CQ95604 PPIAP10-201ENST00000438675 458 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 FTLP8-201ENST00000446770 267 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 FTH1P2-201ENST00000466086 412 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 AC004453.1-201ENST00000487895 408 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-CQ95604 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-CQ95604 RBBP4P6-201ENST00000508098 202 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-CQ95604 SNORA25.11-201ENST00000515935 105 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 SNORA70.20-201ENST00000516848 126 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.54□□□□□ -1.36
HLA-CQ95604 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HLA-CQ95604 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.54□□□□□ -1.36
HLA-CQ95604 RN7SL802P-201ENST00000577858 299 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-CQ95604 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-CQ95604 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.54□□□□□ -1.36
HLA-CQ95604 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.54□□□□□ -1.36
HLA-CQ95604 AC025857.2-201ENST00000602711 238 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 AC174048.1-201ENST00000603389 144 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 MIR6864-201ENST00000617935 70 ntBASIC6.54□□□□□ -1.36
HLA-CQ95604 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.54□□□□□ -1.36
HLA-CQ95604 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.54□□□□□ -1.36
HLA-CQ95604 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.54□□□□□ -1.36
HLA-CQ95604 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HLA-CQ95604 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HLA-CQ95604 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HLA-CQ95604 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
HLA-CQ95604 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms