Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 RNU6-55P-201ENST00000411092 107 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 RNU6-954P-201ENST00000411355 107 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 AP002884.2-201ENST00000471647 395 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 RPS17P11-201ENST00000474297 293 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 RN7SKP272-201ENST00000516988 232 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 OR5G4P-201ENST00000525251 760 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 ATP5F1P7-201ENST00000567330 760 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 MIR5047-201ENST00000579212 100 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 AC015911.5-201ENST00000587076 451 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 AC025946.2-201ENST00000603398 234 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 AC026790.2-201ENST00000606282 430 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 AC064859.1-201ENST00000624741 174 ntBASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COL22A1Q8NFW1 AC007342.7-201ENST00000624610 2337 ntBASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 MTCYBP29-201ENST00000436327 1006 ntBASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 AL450263.2-201ENST00000439400 589 ntBASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 RNA5SP24-201ENST00000516478 95 ntBASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.01□□□□□ -1.77
COL22A1Q8NFW1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 CD2-201ENST00000369477 478 ntTSL 2 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL22A1Q8NFW1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 RPS4XP5-202ENST00000449995 1334 ntBASIC4□□□□□ -1.77
COL22A1Q8NFW1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 AC008549.1-201ENST00000512900 643 ntBASIC4□□□□□ -1.77
COL22A1Q8NFW1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL22A1Q8NFW1 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 AC096947.1-201ENST00000603233 470 ntBASIC4□□□□□ -1.77
COL22A1Q8NFW1 AC017002.4-201ENST00000604721 1525 ntBASIC4□□□□□ -1.77
COL22A1Q8NFW1 AC034236.3-201ENST00000605999 461 ntBASIC4□□□□□ -1.77
COL22A1Q8NFW1 OR6R2P-201ENST00000609216 300 ntBASIC4□□□□□ -1.77
COL22A1Q8NFW1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL22A1Q8NFW1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL22A1Q8NFW1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4□□□□□ -1.77
COL22A1Q8NFW1 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 RNU6-618P-201ENST00000363518 112 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 MIR504-201ENST00000385065 83 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 MIR887-201ENST00000401258 79 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 NIPA2P5-201ENST00000452282 464 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 MTCO3P20-201ENST00000454926 688 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 NECAP1P2-201ENST00000455668 727 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 snoU13.26-201ENST00000459452 105 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AC117525.1-201ENST00000515228 503 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 RNU1-143P-201ENST00000516296 146 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 EIF1AXP2-201ENST00000555940 413 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 HMGB1P51-201ENST00000605166 638 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 U1.23-201ENST00000610293 146 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 RNU1-68P-201ENST00000615382 146 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 U1.39-201ENST00000621562 146 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 MIR30E-201ENST00000362104 92 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 RNU6-225P-201ENST00000384613 103 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 FTH1P6-201ENST00000430768 320 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AL365396.1-201ENST00000430854 671 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 CALM1P2-201ENST00000452941 448 ntBASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.99□□□□□ -1.77
COL22A1Q8NFW1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
COL22A1Q8NFW1 AC107027.3-201ENST00000565095 3473 ntBASIC3.98□□□□□ -1.77
COL22A1Q8NFW1 RNU4-23P-201ENST00000362839 140 ntBASIC3.98□□□□□ -1.77
COL22A1Q8NFW1 AL360182.1-201ENST00000397433 468 ntBASIC3.98□□□□□ -1.77
COL22A1Q8NFW1 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.98□□□□□ -1.77
COL22A1Q8NFW1 AC233981.1-201ENST00000423224 461 ntBASIC3.98□□□□□ -1.77
COL22A1Q8NFW1 AL355994.1-201ENST00000424379 260 ntBASIC3.98□□□□□ -1.77
COL22A1Q8NFW1 AL445528.1-201ENST00000426330 420 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms