Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC107016.2-201ENST00000547968 190 ntBASIC3.67□□□□□ -1.82
RTL9Q8NET4 AP000919.1-202ENST00000581139 1264 ntBASIC3.67□□□□□ -1.82
RTL9Q8NET4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.67□□□□□ -1.82
RTL9Q8NET4 AL159169.2-201ENST00000610061 1269 ntBASIC3.67□□□□□ -1.82
RTL9Q8NET4 AC007318.2-201ENST00000620999 243 ntBASIC3.67□□□□□ -1.82
RTL9Q8NET4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTL9Q8NET4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTL9Q8NET4 AC092435.3-201ENST00000565538 3654 ntBASIC3.67□□□□□ -1.82
RTL9Q8NET4 BX005019.1-201ENST00000561881 1810 ntBASIC3.67□□□□□ -1.82
RTL9Q8NET4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.67□□□□□ -1.82
RTL9Q8NET4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTL9Q8NET4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTL9Q8NET4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTL9Q8NET4 SNORA9.2-201ENST00000365361 133 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 MTCO3P31-201ENST00000405526 789 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL9Q8NET4 AL445528.1-201ENST00000426330 420 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 ARF4P2-201ENST00000430209 526 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 AC245517.2-201ENST00000442890 346 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 HMGB3P8-201ENST00000449709 577 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 AL109933.2-201ENST00000452651 260 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.66□□□□□ -1.82
RTL9Q8NET4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL9Q8NET4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTL9Q8NET4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.66□□□□□ -1.82
RTL9Q8NET4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL9Q8NET4 HMGB1P6-201ENST00000569046 646 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL9Q8NET4 AC011492.1-201ENST00000600023 315 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 AL356490.1-201ENST00000623079 479 ntBASIC3.66□□□□□ -1.82
RTL9Q8NET4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RTL9Q8NET4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTL9Q8NET4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RTL9Q8NET4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RTL9Q8NET4 ELL2P4-201ENST00000446870 1376 ntBASIC3.65□□□□□ -1.82
RTL9Q8NET4 GTF2IP23-201ENST00000423746 351 ntBASIC3.65□□□□□ -1.82
RTL9Q8NET4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RTL9Q8NET4 AC073069.1-201ENST00000428657 441 ntBASIC3.65□□□□□ -1.82
RTL9Q8NET4 AL049830.2-201ENST00000480072 201 ntBASIC3.65□□□□□ -1.82
RTL9Q8NET4 TRAV31-201ENST00000502780 342 ntBASIC3.65□□□□□ -1.82
RTL9Q8NET4 OR5H3P-201ENST00000502817 919 ntBASIC3.65□□□□□ -1.82
RTL9Q8NET4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
RTL9Q8NET4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.65□□□□□ -1.82
RTL9Q8NET4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.65□□□□□ -1.82
RTL9Q8NET4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.65□□□□□ -1.82
RTL9Q8NET4 AC024153.1-201ENST00000603103 365 ntBASIC3.65□□□□□ -1.82
RTL9Q8NET4 AC007566.2-201ENST00000603642 413 ntBASIC3.65□□□□□ -1.82
RTL9Q8NET4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.65□□□□□ -1.82
RTL9Q8NET4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RTL9Q8NET4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTL9Q8NET4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTL9Q8NET4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTL9Q8NET4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTL9Q8NET4 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.65□□□□□ -1.83
RTL9Q8NET4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTL9Q8NET4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RTL9Q8NET4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RTL9Q8NET4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
RTL9Q8NET4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTL9Q8NET4 RPL5P19-201ENST00000404228 893 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 AL139095.1-201ENST00000404326 391 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.64□□□□□ -1.83
RTL9Q8NET4 AC112653.1-201ENST00000443851 386 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 HMGB3P6-201ENST00000444896 598 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 SLC31A1P1-201ENST00000451221 567 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 CEACAMP4-201ENST00000457676 421 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 AC010468.1-201ENST00000461022 817 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.64□□□□□ -1.83
RTL9Q8NET4 HMGB1P3-201ENST00000502802 616 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 AC010486.1-201ENST00000511793 424 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 AC103783.1-201ENST00000520506 373 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.64□□□□□ -1.83
RTL9Q8NET4 AC079600.2-201ENST00000550076 130 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.64□□□□□ -1.83
RTL9Q8NET4 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.64□□□□□ -1.83
RTL9Q8NET4 MIR3186-201ENST00000577404 85 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.64□□□□□ -1.83
RTL9Q8NET4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
RTL9Q8NET4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 AL592494.2-201ENST00000425455 1548 ntBASIC3.64□□□□□ -1.83
RTL9Q8NET4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTL9Q8NET4 RNU4-82P-201ENST00000362443 140 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 RNU6-805P-201ENST00000365643 106 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 RNA5SP184-201ENST00000411071 108 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 AC069218.2-201ENST00000411665 344 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 AC022018.1-201ENST00000430685 241 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 HMGB3P10-201ENST00000434734 572 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 RPL23AP22-201ENST00000437556 453 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 AL138787.1-202ENST00000437804 898 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 RPS24P13-201ENST00000442520 397 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 RPL7P31-201ENST00000450192 724 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 MRPL35P4-201ENST00000453682 566 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 CFTRP1-201ENST00000456646 183 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 AC008481.1-201ENST00000463278 396 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
RTL9Q8NET4 COX6CP8-201ENST00000522620 226 ntBASIC3.63□□□□□ -1.83
RTL9Q8NET4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms