Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 BTBD10P1-201ENST00000549824 1352 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 OR5P1P-201ENST00000299512 925 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 OR4A15-201ENST00000314706 1035 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 RNU6-462P-201ENST00000362659 105 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC083875.1-201ENST00000419509 405 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 SDCBPP2-201ENST00000424643 885 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC021660.1-201ENST00000465006 554 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC010625.1-201ENST00000511296 403 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC026412.2-201ENST00000512270 1075 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AP002963.1-201ENST00000530590 184 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 CYCSP2-201ENST00000558168 301 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 ZNF415P1-201ENST00000582279 1166 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 SNORA51-201ENST00000606420 132 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC239868.4-201ENST00000608318 671 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC116447.1-201ENST00000613153 453 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC010678.1-201ENST00000614118 713 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 AC083843.3-201ENST00000623679 2186 ntBASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.48□□□□□ -1.53
SMC1BQ8NDV3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 NEAT1-202ENST00000501122 22743 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 RNA5SP119-201ENST00000362715 117 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 RNU6-723P-201ENST00000383973 107 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC007066.1-201ENST00000392902 381 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AL078604.1-201ENST00000404609 466 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 RNU2-16P-201ENST00000410712 136 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 MTCO1P21-201ENST00000416634 589 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC099336.2-201ENST00000422457 254 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AL445584.1-201ENST00000431451 330 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 COX6CP12-201ENST00000446748 202 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 ST13P20-201ENST00000447996 1065 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC099560.2-201ENST00000457554 255 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 RNA5SP269-201ENST00000459032 137 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 RPL7P15-201ENST00000461190 712 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 RPL30P9-201ENST00000465586 330 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC079140.3-201ENST00000511111 550 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AL117351.2-201ENST00000513571 157 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC116347.2-201ENST00000514912 523 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC040958.1-201ENST00000561102 201 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 SULT1C2P1-202ENST00000562418 459 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 EIF5A2P1-201ENST00000564027 460 ntBASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.47□□□□□ -1.53
SMC1BQ8NDV3 AP001004.1-201ENST00000582468 324 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms