Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.57□□□□□ -1.36
CTC1Q2NKJ3 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 CASC19-284ENST00000642142 1868 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 CASC19-228ENST00000641414 1684 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC007114.2-201ENST00000576014 4281 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 Y_RNA.19-201ENST00000362462 99 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 Y_RNA.170-201ENST00000363746 110 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RNU6-853P-201ENST00000364306 107 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 Y_RNA.276-201ENST00000364732 109 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RNU6-1117P-201ENST00000384525 104 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC116036.1-201ENST00000412199 367 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 BX323845.3-201ENST00000428215 527 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AL451139.1-201ENST00000434718 346 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RPL23AP89-201ENST00000439324 255 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AL118520.1-201ENST00000450770 291 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AL445687.2-201ENST00000458156 728 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RPL7P49-201ENST00000471402 708 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RN7SL799P-201ENST00000475891 298 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 TRBVB-201ENST00000477100 408 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC090686.1-201ENST00000481577 749 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RNU6-1278P-201ENST00000516130 107 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 Y_RNA.683-201ENST00000516508 93 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AP006245.2-201ENST00000522004 300 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC135001.1-201ENST00000544546 283 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AL049779.3-201ENST00000557141 606 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC010547.6-201ENST00000571789 193 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC092747.3-201ENST00000603769 301 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 SUMO2P15-201ENST00000604285 278 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 U2.14-201ENST00000615943 113 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AC021753.1-201ENST00000635724 168 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 AL359893.1-201ENST00000447628 1580 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 DOCK11P1-201ENST00000553480 5932 ntBASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTC1Q2NKJ3 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 SNORD50.1-201ENST00000362987 71 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 RNU1-49P-201ENST00000363468 159 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 SNORD8-201ENST00000363915 110 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AC012075.1-201ENST00000436549 580 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 SNORA25.11-201ENST00000515935 105 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AP003497.1-201ENST00000528472 562 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AC087441.2-201ENST00000529141 262 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AC040926.1-201ENST00000530195 238 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AC090751.1-201ENST00000566966 267 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 RAC1P9-201ENST00000604990 392 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 MRPL57P1-201ENST00000621486 265 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 AC018445.2-201ENST00000622987 260 ntBASIC6.55□□□□□ -1.36
CTC1Q2NKJ3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms