Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AL589674.2-201ENST00000604304 337 ntBASIC6.12□□□□□ -1.43
FOXC1Q12948 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
FOXC1Q12948 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.12□□□□□ -1.43
FOXC1Q12948 AC107081.3-201ENST00000612715 2034 ntBASIC6.12□□□□□ -1.43
FOXC1Q12948 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXC1Q12948 AC079753.1-201ENST00000623243 3868 ntBASIC6.12□□□□□ -1.43
FOXC1Q12948 AC073488.2-201ENST00000631903 751 ntBASIC6.12□□□□□ -1.43
FOXC1Q12948 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.12□□□□□ -1.43
FOXC1Q12948 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
FOXC1Q12948 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
FOXC1Q12948 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
FOXC1Q12948 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC6.12□□□□□ -1.43
FOXC1Q12948 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
FOXC1Q12948 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
FOXC1Q12948 HAUS6P2-201ENST00000433254 2404 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXC1Q12948 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
FOXC1Q12948 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 RNU1-134P-201ENST00000362935 165 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 Y_RNA.568-201ENST00000384742 113 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 RNU6-131P-201ENST00000391144 107 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXC1Q12948 CBX1P3-201ENST00000413296 527 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXC1Q12948 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXC1Q12948 MTND3P9-201ENST00000429526 346 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXC1Q12948 AC096922.1-201ENST00000461635 651 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 AC098583.1-201ENST00000480875 255 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 ATP5LP5-201ENST00000483050 299 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 RPL23AP55-201ENST00000498163 452 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC6.11□□□□□ -1.43
FOXC1Q12948 YWHAEP4-201ENST00000505390 198 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 KHDC1P1-201ENST00000511053 508 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 IGHVII-53-1-201ENST00000519538 255 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXC1Q12948 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXC1Q12948 MIR5701-3-201ENST00000578890 82 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 MIR5701-1-201ENST00000585138 82 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC6.11□□□□□ -1.43
FOXC1Q12948 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXC1Q12948 MIR5701-2-201ENST00000615634 82 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC6.11□□□□□ -1.43
FOXC1Q12948 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
FOXC1Q12948 Z75746.1-201ENST00000440243 2080 ntBASIC6.11□□□□□ -1.43
FOXC1Q12948 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.11□□□□□ -1.43
FOXC1Q12948 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
FOXC1Q12948 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
FOXC1Q12948 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.11□□□□□ -1.43
FOXC1Q12948 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
FOXC1Q12948 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
FOXC1Q12948 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
FOXC1Q12948 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXC1Q12948 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
FOXC1Q12948 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
FOXC1Q12948 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
FOXC1Q12948 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 Y_RNA.27-201ENST00000362540 103 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 RNA5SP346-201ENST00000363541 121 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 Y_RNA.441-201ENST00000384123 112 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 SNORA69.1-201ENST00000390904 137 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 Y_RNA.586-201ENST00000391146 98 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 RNU6-918P-201ENST00000391219 106 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 RPS3AP2-201ENST00000407190 754 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 RNU4-34P-201ENST00000410431 124 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 RPL23AP36-201ENST00000413895 458 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXC1Q12948 RPL23AP38-201ENST00000423801 469 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 GSTA6P-201ENST00000424144 582 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXC1Q12948 PRDX3P3-201ENST00000447765 522 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 AC114982.1-201ENST00000469402 321 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 RN7SL643P-201ENST00000471845 291 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms