Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PRKDCP78527 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PRKDCP78527 RNU6-1159P-201ENST00000362933 107 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 RPL31P45-201ENST00000419532 356 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC2.02□□□□□ -2.09
PRKDCP78527 OR2B8P-201ENST00000432841 938 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 MTCO3P16-201ENST00000454456 754 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 AC093663.2-201ENST00000484625 313 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.02□□□□□ -2.09
PRKDCP78527 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.02□□□□□ -2.09
PRKDCP78527 TCP11X3P-202ENST00000514289 1254 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PRKDCP78527 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
PRKDCP78527 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
PRKDCP78527 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PRKDCP78527 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.02□□□□□ -2.09
PRKDCP78527 RANP7-201ENST00000418085 644 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.02□□□□□ -2.09
PRKDCP78527 TRBV1-201ENST00000476502 284 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 AC006445.2-201ENST00000510061 472 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.02□□□□□ -2.09
PRKDCP78527 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.02□□□□□ -2.09
PRKDCP78527 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.02□□□□□ -2.09
PRKDCP78527 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.02□□□□□ -2.09
PRKDCP78527 HMGB1P50-201ENST00000605814 607 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 RMST_8.1-201ENST00000610287 165 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 NCAPGP1-201ENST00000505112 1814 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 Z98941.1-201ENST00000407764 100 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.01□□□□□ -2.09
PRKDCP78527 RN7SL330P-201ENST00000469709 307 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 AC108729.3-201ENST00000513484 108 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.01□□□□□ -2.09
PRKDCP78527 OR5BN1P-201ENST00000532955 829 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 AC004696.1-201ENST00000614345 607 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
PRKDCP78527 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 RNA5SP322-201ENST00000363617 119 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.01□□□□□ -2.09
PRKDCP78527 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.01□□□□□ -2.09
PRKDCP78527 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.01□□□□□ -2.09
PRKDCP78527 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
PRKDCP78527 RANP4-201ENST00000413361 655 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 AL135786.1-201ENST00000415892 214 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.01□□□□□ -2.09
PRKDCP78527 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.01□□□□□ -2.09
PRKDCP78527 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.01□□□□□ -2.09
PRKDCP78527 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.01□□□□□ -2.09
PRKDCP78527 TRAV37-201ENST00000553906 342 ntBASIC2.01□□□□□ -2.09
PRKDCP78527 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC2.01□□□□□ -2.09
PRKDCP78527 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PRKDCP78527 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2□□□□□ -2.09
PRKDCP78527 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2□□□□□ -2.09
PRKDCP78527 PTP4A1P5-201ENST00000420305 455 ntBASIC2□□□□□ -2.09
PRKDCP78527 AC009414.1-201ENST00000427200 443 ntBASIC2□□□□□ -2.09
PRKDCP78527 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 MTCO1P52-201ENST00000433928 531 ntBASIC2□□□□□ -2.09
PRKDCP78527 AL513043.1-201ENST00000439124 535 ntBASIC2□□□□□ -2.09
PRKDCP78527 AC009039.2-201ENST00000624524 529 ntBASIC2□□□□□ -2.09
PRKDCP78527 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
PRKDCP78527 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2□□□□□ -2.09
PRKDCP78527 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 OR4G1P-202ENST00000641173 1788 ntBASIC2□□□□□ -2.09
PRKDCP78527 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
PRKDCP78527 Y_RNA.116-201ENST00000363292 103 ntBASIC2□□□□□ -2.09
PRKDCP78527 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 MIR4738-201ENST00000579134 87 ntBASIC2□□□□□ -2.09
PRKDCP78527 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2□□□□□ -2.09
PRKDCP78527 AL359715.5-201ENST00000623431 443 ntBASIC2□□□□□ -2.09
PRKDCP78527 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
PRKDCP78527 TAB3P1-202ENST00000452645 1634 ntBASIC2□□□□□ -2.09
PRKDCP78527 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 RPL7P52-201ENST00000449200 742 ntBASIC2□□□□□ -2.09
PRKDCP78527 DNAJC19P1-201ENST00000455312 319 ntBASIC2□□□□□ -2.09
PRKDCP78527 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2□□□□□ -2.09
PRKDCP78527 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2□□□□□ -2.09
PRKDCP78527 Y_RNA.670-201ENST00000516255 105 ntBASIC2□□□□□ -2.09
PRKDCP78527 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2□□□□□ -2.09
PRKDCP78527 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
PRKDCP78527 Z82195.1-201ENST00000604558 398 ntBASIC2□□□□□ -2.09
PRKDCP78527 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
PRKDCP78527 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2□□□□□ -2.09
PRKDCP78527 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC2□□□□□ -2.09
PRKDCP78527 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC2□□□□□ -2.09
PRKDCP78527 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC1.99□□□□□ -2.09
PRKDCP78527 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms