Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RPL5P22-201ENST00000480199 884 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC008628.2-201ENST00000502605 298 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.55□□□□□ -1.68
CLRN1P58418 AC024558.1-201ENST00000505008 528 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CLRN1P58418 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.55□□□□□ -1.68
CLRN1P58418 NDUFB4P11-201ENST00000560510 395 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 AC018552.3-201ENST00000567416 561 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC019322.1-201ENST00000571869 389 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC099489.2-201ENST00000574976 260 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AP005119.2-201ENST00000579735 1105 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.55□□□□□ -1.68
CLRN1P58418 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.55□□□□□ -1.68
CLRN1P58418 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 AC009994.1-201ENST00000606889 253 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 BX664608.1-201ENST00000610519 487 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC126915.2-201ENST00000610957 190 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 Y_RNA.804-201ENST00000615262 101 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 AC104260.1-201ENST00000616660 539 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLRN1P58418 AP005264.7-201ENST00000625003 745 ntBASIC4.55□□□□□ -1.68
CLRN1P58418 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.55□□□□□ -1.68
CLRN1P58418 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLRN1P58418 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLRN1P58418 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLRN1P58418 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLRN1P58418 AC092447.10-201ENST00000620607 1652 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
CLRN1P58418 AC138915.3-201ENST00000562908 1389 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CLRN1P58418 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLRN1P58418 AL031119.1-201ENST00000404707 1879 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLRN1P58418 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLRN1P58418 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.54□□□□□ -1.68
CLRN1P58418 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLRN1P58418 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.54□□□□□ -1.68
CLRN1P58418 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLRN1P58418 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLRN1P58418 AL391361.1-201ENST00000405580 489 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AMD1P2-201ENST00000412936 992 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.54□□□□□ -1.68
CLRN1P58418 AC007738.1-201ENST00000413892 348 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.54□□□□□ -1.68
CLRN1P58418 AC009302.1-201ENST00000417147 390 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLRN1P58418 SDCBPP1-201ENST00000440192 890 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.54□□□□□ -1.68
CLRN1P58418 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.54□□□□□ -1.68
CLRN1P58418 AC011005.3-201ENST00000491624 395 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 ENPP7P11-201ENST00000505915 627 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.54□□□□□ -1.68
CLRN1P58418 AC093677.1-201ENST00000514414 678 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.54□□□□□ -1.68
CLRN1P58418 RN7SKP260-201ENST00000516907 149 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.54□□□□□ -1.68
CLRN1P58418 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.54□□□□□ -1.68
CLRN1P58418 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLRN1P58418 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLRN1P58418 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.54□□□□□ -1.68
CLRN1P58418 AL512310.1-201ENST00000548639 172 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.54□□□□□ -1.68
CLRN1P58418 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.54□□□□□ -1.68
CLRN1P58418 MIR3118-1-201ENST00000581787 76 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.54□□□□□ -1.68
CLRN1P58418 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.54□□□□□ -1.68
CLRN1P58418 AC009033.1-201ENST00000624279 431 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.54□□□□□ -1.68
CLRN1P58418 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLRN1P58418 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CLRN1P58418 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.54□□□□□ -1.68
CLRN1P58418 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.54□□□□□ -1.68
CLRN1P58418 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLRN1P58418 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.54□□□□□ -1.68
CLRN1P58418 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLRN1P58418 AC010928.1-201ENST00000592477 1447 ntBASIC4.54□□□□□ -1.68
CLRN1P58418 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.54□□□□□ -1.68
CLRN1P58418 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CLRN1P58418 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLRN1P58418 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLRN1P58418 SOCS5P3-201ENST00000425115 1576 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC015813.6-201ENST00000624409 5808 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLRN1P58418 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLRN1P58418 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLRN1P58418 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.53□□□□□ -1.68
CLRN1P58418 FRG1BP-201ENST00000278882 761 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 RNU5E-1-201ENST00000362477 120 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 BTBD10P2-201ENST00000404779 676 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 AC211486.3-201ENST00000412694 621 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 JKAMPP1-201ENST00000413804 919 ntBASIC4.53□□□□□ -1.68
CLRN1P58418 NUP35P2-201ENST00000416748 943 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms