Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.81□□□□□ -1.8
LIMK2P53671 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.81□□□□□ -1.8
LIMK2P53671 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.81□□□□□ -1.8
LIMK2P53671 AC119751.1-201ENST00000513357 765 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 RN7SKP83-201ENST00000516512 178 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 HIGD1AP6-201ENST00000521833 279 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.81□□□□□ -1.8
LIMK2P53671 EEF1A1P37-201ENST00000522748 715 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.81□□□□□ -1.8
LIMK2P53671 AC092851.1-201ENST00000535964 478 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.81□□□□□ -1.8
LIMK2P53671 AC004217.3-201ENST00000551552 878 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.81□□□□□ -1.8
LIMK2P53671 AC099489.2-201ENST00000574976 260 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.81□□□□□ -1.8
LIMK2P53671 BPTFP1-201ENST00000579209 492 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 AC008687.2-201ENST00000597865 520 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 RPP40P2-201ENST00000603596 712 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 AP004247.3-201ENST00000608682 624 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 AP000484.1-201ENST00000620067 1252 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.81□□□□□ -1.8
LIMK2P53671 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.81□□□□□ -1.8
LIMK2P53671 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.81□□□□□ -1.8
LIMK2P53671 MAPK10-372ENST00000641954 3413 ntBASIC3.81□□□□□ -1.8
LIMK2P53671 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LIMK2P53671 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LIMK2P53671 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
LIMK2P53671 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LIMK2P53671 AC106871.1-201ENST00000568324 3102 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIMK2P53671 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIMK2P53671 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.8□□□□□ -1.8
LIMK2P53671 ZNF29P-201ENST00000225587 168 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
LIMK2P53671 RNA5SP124-201ENST00000362739 110 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
LIMK2P53671 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.8□□□□□ -1.8
LIMK2P53671 SNORA3.3-201ENST00000408712 125 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AC092638.1-201ENST00000411966 1275 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 RAB9AP3-201ENST00000412737 573 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 RPS12P23-201ENST00000419579 400 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.8□□□□□ -1.8
LIMK2P53671 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.8□□□□□ -1.8
LIMK2P53671 HIGD1AP12-201ENST00000427832 281 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIMK2P53671 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.8□□□□□ -1.8
LIMK2P53671 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LIMK2P53671 EXOSC3P1-201ENST00000448649 500 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 RAB9AP1-201ENST00000449393 573 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 MTCO3P16-201ENST00000454456 754 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 RPL37P6-202ENST00000464216 403 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.8□□□□□ -1.8
LIMK2P53671 AC108941.1-201ENST00000502853 530 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AC093534.1-201ENST00000504977 132 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.8□□□□□ -1.8
LIMK2P53671 RNU6-488P-201ENST00000515918 99 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 SNORA19.3-201ENST00000516165 130 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 SOD1P3-201ENST00000518682 454 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AP001207.2-201ENST00000519490 539 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.8□□□□□ -1.8
LIMK2P53671 PTP4A1P6-201ENST00000531034 478 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 LRRC34P1-201ENST00000542742 915 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.8□□□□□ -1.8
LIMK2P53671 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.8□□□□□ -1.8
LIMK2P53671 NIFKP8-201ENST00000560500 874 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.8□□□□□ -1.8
LIMK2P53671 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.8□□□□□ -1.8
LIMK2P53671 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.8□□□□□ -1.8
LIMK2P53671 AC079684.1-201ENST00000621405 437 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AC006963.1-201ENST00000624003 1052 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 AC139713.2-210ENST00000641741 992 ntBASIC3.8□□□□□ -1.8
LIMK2P53671 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.8□□□□□ -1.8
LIMK2P53671 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LIMK2P53671 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LIMK2P53671 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
LIMK2P53671 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK2P53671 SGO1P1-201ENST00000603525 1447 ntBASIC3.79□□□□□ -1.8
LIMK2P53671 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK2P53671 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK2P53671 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LIMK2P53671 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.79□□□□□ -1.8
LIMK2P53671 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.79□□□□□ -1.8
LIMK2P53671 AC107081.3-201ENST00000612715 2034 ntBASIC3.79□□□□□ -1.8
LIMK2P53671 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LIMK2P53671 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK2P53671 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LIMK2P53671 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.79□□□□□ -1.8
LIMK2P53671 MIR16-1-201ENST00000385271 89 ntBASIC3.79□□□□□ -1.8
LIMK2P53671 RNA5SP239-201ENST00000410218 129 ntBASIC3.79□□□□□ -1.8
LIMK2P53671 OR51A3P-201ENST00000413596 924 ntBASIC3.79□□□□□ -1.8
LIMK2P53671 AC004987.3-201ENST00000413879 771 ntBASIC3.79□□□□□ -1.8
LIMK2P53671 RPL31P45-201ENST00000419532 356 ntBASIC3.79□□□□□ -1.8
LIMK2P53671 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.79□□□□□ -1.8
LIMK2P53671 FTH1P6-201ENST00000430768 320 ntBASIC3.79□□□□□ -1.8
LIMK2P53671 MOB1AP1-201ENST00000430903 535 ntBASIC3.79□□□□□ -1.8
LIMK2P53671 AL513175.1-201ENST00000431492 780 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms