Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4□□□□□ -1.77
LHX1P48742 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
LHX1P48742 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
LHX1P48742 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 RNU6-1066P-201ENST00000363573 105 ntBASIC4□□□□□ -1.77
LHX1P48742 RNU4-68P-201ENST00000364314 141 ntBASIC4□□□□□ -1.77
LHX1P48742 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4□□□□□ -1.77
LHX1P48742 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
LHX1P48742 RNU6-906P-201ENST00000384700 70 ntBASIC4□□□□□ -1.77
LHX1P48742 SNORA40.2-201ENST00000390847 128 ntBASIC4□□□□□ -1.77
LHX1P48742 RNA5SP424-201ENST00000390988 115 ntBASIC4□□□□□ -1.77
LHX1P48742 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
LHX1P48742 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4□□□□□ -1.77
LHX1P48742 RAB9AP3-201ENST00000412737 573 ntBASIC4□□□□□ -1.77
LHX1P48742 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4□□□□□ -1.77
LHX1P48742 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 ELOCP6-201ENST00000429066 328 ntBASIC4□□□□□ -1.77
LHX1P48742 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4□□□□□ -1.77
LHX1P48742 B3GNT2P1-201ENST00000434960 952 ntBASIC4□□□□□ -1.77
LHX1P48742 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4□□□□□ -1.77
LHX1P48742 GTF2IP7-202ENST00000436677 309 ntBASIC4□□□□□ -1.77
LHX1P48742 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4□□□□□ -1.77
LHX1P48742 RAB9AP1-201ENST00000449393 573 ntBASIC4□□□□□ -1.77
LHX1P48742 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4□□□□□ -1.77
LHX1P48742 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4□□□□□ -1.77
LHX1P48742 ELOCP12-201ENST00000458706 328 ntBASIC4□□□□□ -1.77
LHX1P48742 RPL37P6-202ENST00000464216 403 ntBASIC4□□□□□ -1.77
LHX1P48742 AC087385.1-201ENST00000475062 312 ntBASIC4□□□□□ -1.77
LHX1P48742 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4□□□□□ -1.77
LHX1P48742 AC134050.1-201ENST00000495088 933 ntBASIC4□□□□□ -1.77
LHX1P48742 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4□□□□□ -1.77
LHX1P48742 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4□□□□□ -1.77
LHX1P48742 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4□□□□□ -1.77
LHX1P48742 RNU1-95P-201ENST00000516357 160 ntBASIC4□□□□□ -1.77
LHX1P48742 RNU1-128P-201ENST00000516704 160 ntBASIC4□□□□□ -1.77
LHX1P48742 TRMT10BP1-201ENST00000519377 943 ntBASIC4□□□□□ -1.77
LHX1P48742 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4□□□□□ -1.77
LHX1P48742 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4□□□□□ -1.77
LHX1P48742 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 AC006960.3-201ENST00000561845 705 ntBASIC4□□□□□ -1.77
LHX1P48742 AGGF1P8-201ENST00000562979 1000 ntBASIC4□□□□□ -1.77
LHX1P48742 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 AC068790.5-201ENST00000602741 355 ntBASIC4□□□□□ -1.77
LHX1P48742 AC021749.1-201ENST00000604322 607 ntBASIC4□□□□□ -1.77
LHX1P48742 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4□□□□□ -1.77
LHX1P48742 AC099786.3-201ENST00000565735 1410 ntBASIC4□□□□□ -1.77
LHX1P48742 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
LHX1P48742 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4□□□□□ -1.77
LHX1P48742 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.99□□□□□ -1.77
LHX1P48742 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LHX1P48742 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LHX1P48742 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LHX1P48742 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
LHX1P48742 RNA5SP124-201ENST00000362739 110 ntBASIC3.99□□□□□ -1.77
LHX1P48742 RNU6-1243P-201ENST00000364028 107 ntBASIC3.99□□□□□ -1.77
LHX1P48742 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.99□□□□□ -1.77
LHX1P48742 RNU6-441P-201ENST00000384545 106 ntBASIC3.99□□□□□ -1.77
LHX1P48742 MIR200C-201ENST00000384980 68 ntBASIC3.99□□□□□ -1.77
LHX1P48742 SNORD65.1-201ENST00000390889 71 ntBASIC3.99□□□□□ -1.77
LHX1P48742 RPL21P17-201ENST00000397467 475 ntBASIC3.99□□□□□ -1.77
LHX1P48742 FCF1P2-201ENST00000415284 583 ntBASIC3.99□□□□□ -1.77
LHX1P48742 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.99□□□□□ -1.77
LHX1P48742 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 USP12PY-201ENST00000427677 1064 ntBASIC3.99□□□□□ -1.77
LHX1P48742 SEPT7P5-201ENST00000434048 306 ntBASIC3.99□□□□□ -1.77
LHX1P48742 NANOGP2-201ENST00000435391 727 ntBASIC3.99□□□□□ -1.77
LHX1P48742 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.99□□□□□ -1.77
LHX1P48742 Z80107.1-201ENST00000436830 412 ntBASIC3.99□□□□□ -1.77
LHX1P48742 AC093155.1-201ENST00000440164 826 ntBASIC3.99□□□□□ -1.77
LHX1P48742 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.99□□□□□ -1.77
LHX1P48742 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LHX1P48742 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 AC091564.1-201ENST00000464563 479 ntBASIC3.99□□□□□ -1.77
LHX1P48742 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 RN7SKP277-201ENST00000516895 283 ntBASIC3.99□□□□□ -1.77
LHX1P48742 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.99□□□□□ -1.77
LHX1P48742 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.99□□□□□ -1.77
LHX1P48742 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.99□□□□□ -1.77
LHX1P48742 AL035411.2-201ENST00000604022 421 ntBASIC3.99□□□□□ -1.77
LHX1P48742 AL139286.1-201ENST00000604465 483 ntBASIC3.99□□□□□ -1.77
LHX1P48742 AP003117.2-201ENST00000606010 545 ntBASIC3.99□□□□□ -1.77
LHX1P48742 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.99□□□□□ -1.77
LHX1P48742 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms