Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 HSPE1P6-201ENST00000479457 291 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SCN4AP35499 AP001207.2-201ENST00000519490 539 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.58□□□□□ -1.84
SCN4AP35499 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN4AP35499 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN4AP35499 ASNSP3-201ENST00000451989 1306 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCN4AP35499 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN4AP35499 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN4AP35499 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.58□□□□□ -1.84
SCN4AP35499 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN4AP35499 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN4AP35499 Y_RNA.62-201ENST00000362840 99 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN4AP35499 AL513174.1-201ENST00000423182 629 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.58□□□□□ -1.84
SCN4AP35499 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.58□□□□□ -1.84
SCN4AP35499 AC011602.1-201ENST00000546484 331 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 ATP5F1P7-201ENST00000567330 760 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 AL133370.2-201ENST00000619934 439 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 AC006840.1-201ENST00000623069 542 ntBASIC3.58□□□□□ -1.84
SCN4AP35499 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.58□□□□□ -1.84
SCN4AP35499 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SCN4AP35499 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4AP35499 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
SCN4AP35499 RNA5SP508-201ENST00000411327 119 ntBASIC3.57□□□□□ -1.84
SCN4AP35499 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN4AP35499 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4AP35499 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN4AP35499 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.57□□□□□ -1.84
SCN4AP35499 RPL23AP22-201ENST00000437556 453 ntBASIC3.57□□□□□ -1.84
SCN4AP35499 AL513328.1-201ENST00000446460 224 ntBASIC3.57□□□□□ -1.84
SCN4AP35499 METTL15P1-201ENST00000481421 1045 ntBASIC3.57□□□□□ -1.84
SCN4AP35499 AP002770.2-201ENST00000543613 532 ntBASIC3.57□□□□□ -1.84
SCN4AP35499 MTND2P17-201ENST00000550281 688 ntBASIC3.57□□□□□ -1.84
SCN4AP35499 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN4AP35499 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SCN4AP35499 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SCN4AP35499 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SCN4AP35499 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
SCN4AP35499 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
SCN4AP35499 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCN4AP35499 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SCN4AP35499 RPS7P13-201ENST00000413955 498 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN4AP35499 MTND5P23-201ENST00000430812 1655 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 RPS12P18-201ENST00000442381 270 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN4AP35499 snoU13.15-201ENST00000459407 104 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 ZNF542P-204ENST00000482727 1305 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 CUL4AP1-201ENST00000514750 1863 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 AP002812.4-201ENST00000532139 286 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SCN4AP35499 AL049874.4-201ENST00000557593 255 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.56□□□□□ -1.84
SCN4AP35499 AP001542.1-201ENST00000591314 200 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SCN4AP35499 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN4AP35499 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN4AP35499 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN4AP35499 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN4AP35499 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN4AP35499 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN4AP35499 RAD1P1-201ENST00000231383 813 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN4AP35499 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SCN4AP35499 ISCA1P2-201ENST00000438679 421 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN4AP35499 AC112653.1-201ENST00000443851 386 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN4AP35499 RPS3P1-201ENST00000456781 192 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 RNU7-170P-201ENST00000459303 61 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 AC111000.2-201ENST00000507775 550 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN4AP35499 RNA5SP24-201ENST00000516478 95 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN4AP35499 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN4AP35499 SNORA35B-201ENST00000607417 129 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 uc_338.1-201ENST00000612113 180 ntBASIC3.56□□□□□ -1.84
SCN4AP35499 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCN4AP35499 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCN4AP35499 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN4AP35499 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCN4AP35499 RN7SKP44-201ENST00000363602 316 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 HMGB3P18-201ENST00000406327 590 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 AL355994.1-201ENST00000424379 260 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 FTH1P6-201ENST00000430768 320 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.55□□□□□ -1.84
SCN4AP35499 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.55□□□□□ -1.84
SCN4AP35499 RPL12P26-201ENST00000452430 487 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 RPL23AP14-201ENST00000468281 468 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 TRBV8-2-201ENST00000475637 270 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 AC092045.1-201ENST00000495716 1231 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 AC068305.1-201ENST00000497406 726 ntBASIC3.55□□□□□ -1.84
SCN4AP35499 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.55□□□□□ -1.84
SCN4AP35499 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN4AP35499 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN4AP35499 AC107918.3-201ENST00000533272 382 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms