Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.21□□□□□ -1.09
HOXD11P31277 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.21□□□□□ -1.09
HOXD11P31277 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
HOXD11P31277 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC8.21□□□□□ -1.09
HOXD11P31277 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
HOXD11P31277 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
HOXD11P31277 AC068769.1-201ENST00000474767 2426 ntBASIC8.21□□□□□ -1.09
HOXD11P31277 PIK3AP1-203ENST00000371110 3151 ntTSL 2 BASIC8.21□□□□□ -1.09
HOXD11P31277 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC8.21□□□□□ -1.09
HOXD11P31277 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.21□□□□□ -1.09
HOXD11P31277 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
HOXD11P31277 KLF5-205ENST00000539231 2951 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
HOXD11P31277 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
HOXD11P31277 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
HOXD11P31277 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
HOXD11P31277 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC8.21□□□□□ -1.09
HOXD11P31277 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
HOXD11P31277 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
HOXD11P31277 ARSFP1-201ENST00000398758 477 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC8.21□□□□□ -1.1
HOXD11P31277 CYCSP10-201ENST00000417973 294 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 AC015977.2-201ENST00000420852 567 ntTSL 3 BASIC8.21□□□□□ -1.1
HOXD11P31277 AL772161.1-201ENST00000439130 476 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.21□□□□□ -1.1
HOXD11P31277 RPS18P13-201ENST00000461260 454 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 RN7SL251P-201ENST00000464175 297 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC8.21□□□□□ -1.1
HOXD11P31277 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.21□□□□□ -1.1
HOXD11P31277 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC8.21□□□□□ -1.1
HOXD11P31277 SCARNA11.1-201ENST00000516918 132 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 AC124067.1-201ENST00000517897 169 ntTSL 3 BASIC8.21□□□□□ -1.1
HOXD11P31277 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
HOXD11P31277 AL160236.1-201ENST00000556317 195 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 MIR5009-201ENST00000578736 100 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 AC113349.2-201ENST00000607804 377 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 AC015914.2-201ENST00000618167 288 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC8.21□□□□□ -1.1
HOXD11P31277 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC8.21□□□□□ -1.1
HOXD11P31277 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
HOXD11P31277 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC8.21□□□□□ -1.1
HOXD11P31277 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC8.21□□□□□ -1.1
HOXD11P31277 ZNF709-201ENST00000397732 4910 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 AL359922.2-201ENST00000581788 3017 ntBASIC8.21□□□□□ -1.1
HOXD11P31277 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC8.21□□□□□ -1.1
HOXD11P31277 CREB1-201ENST00000353267 7588 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
HOXD11P31277 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.21□□□□□ -1.1
HOXD11P31277 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
HOXD11P31277 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
HOXD11P31277 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
HOXD11P31277 AL133383.2-201ENST00000622958 2336 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.2□□□□□ -1.1
HOXD11P31277 AC026464.2-201ENST00000567834 2421 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXD11P31277 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 MIR549A-201ENST00000385268 96 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 RNA5SP176-201ENST00000390956 110 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 FTH1P20-201ENST00000434913 548 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
HOXD11P31277 AC007215.1-201ENST00000464893 276 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 AC084878.1-201ENST00000480555 648 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 RPL30P5-201ENST00000494923 336 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXD11P31277 RNU6-1299P-201ENST00000516316 100 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 AP006289.1-201ENST00000538089 277 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC8.2□□□□□ -1.1
HOXD11P31277 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.2□□□□□ -1.1
HOXD11P31277 AC245505.3-201ENST00000616788 358 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 MIR548AY-201ENST00000617669 107 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 U6.99-201ENST00000637524 83 ntBASIC8.2□□□□□ -1.1
HOXD11P31277 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC8.2□□□□□ -1.1
HOXD11P31277 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.2□□□□□ -1.1
HOXD11P31277 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC8.2□□□□□ -1.1
HOXD11P31277 TMEM144-216ENST00000514558 3699 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
HOXD11P31277 LMLN-202ENST00000332636 1812 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
HOXD11P31277 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
HOXD11P31277 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
HOXD11P31277 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms