Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU6-352P-201ENST00000516908 107 ntBASIC3.56□□□□□ -1.84
SHC1P29353 NDUFA5P2-201ENST00000519723 344 ntBASIC3.56□□□□□ -1.84
SHC1P29353 AC087369.1-201ENST00000520775 996 ntBASIC3.56□□□□□ -1.84
SHC1P29353 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.56□□□□□ -1.84
SHC1P29353 AC010306.1-201ENST00000523223 1117 ntBASIC3.56□□□□□ -1.84
SHC1P29353 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.56□□□□□ -1.84
SHC1P29353 PDCL2P2-201ENST00000533651 189 ntBASIC3.56□□□□□ -1.84
SHC1P29353 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.56□□□□□ -1.84
SHC1P29353 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHC1P29353 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.56□□□□□ -1.84
SHC1P29353 AC091516.1-201ENST00000549191 703 ntBASIC3.56□□□□□ -1.84
SHC1P29353 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.56□□□□□ -1.84
SHC1P29353 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.56□□□□□ -1.84
SHC1P29353 AC022662.1-201ENST00000580252 331 ntBASIC3.56□□□□□ -1.84
SHC1P29353 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.56□□□□□ -1.84
SHC1P29353 AC125494.3-201ENST00000602759 455 ntBASIC3.56□□□□□ -1.84
SHC1P29353 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.56□□□□□ -1.84
SHC1P29353 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHC1P29353 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.56□□□□□ -1.84
SHC1P29353 AL592148.2-201ENST00000612210 372 ntBASIC3.56□□□□□ -1.84
SHC1P29353 AL392048.1-201ENST00000613946 534 ntBASIC3.56□□□□□ -1.84
SHC1P29353 AL157770.1-201ENST00000623049 439 ntBASIC3.56□□□□□ -1.84
SHC1P29353 AC024595.1-201ENST00000623088 387 ntBASIC3.56□□□□□ -1.84
SHC1P29353 AC007671.2-201ENST00000637344 619 ntBASIC3.56□□□□□ -1.84
SHC1P29353 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHC1P29353 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHC1P29353 UBE3AP2-201ENST00000429033 2259 ntBASIC3.56□□□□□ -1.84
SHC1P29353 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHC1P29353 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.56□□□□□ -1.84
SHC1P29353 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SHC1P29353 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SHC1P29353 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.55□□□□□ -1.84
SHC1P29353 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHC1P29353 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHC1P29353 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SHC1P29353 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHC1P29353 GTF2H2B-203ENST00000508065 1432 ntBASIC3.55□□□□□ -1.84
SHC1P29353 LINC00561-201ENST00000565815 2738 ntBASIC3.55□□□□□ -1.84
SHC1P29353 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.55□□□□□ -1.84
SHC1P29353 SEC63P2-201ENST00000503863 1939 ntBASIC3.55□□□□□ -1.84
SHC1P29353 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SHC1P29353 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.55□□□□□ -1.84
SHC1P29353 snoZ40.1-201ENST00000364540 72 ntBASIC3.55□□□□□ -1.84
SHC1P29353 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.55□□□□□ -1.84
SHC1P29353 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SHC1P29353 RNU6-98P-201ENST00000384173 107 ntBASIC3.55□□□□□ -1.84
SHC1P29353 MIR1251-201ENST00000408552 70 ntBASIC3.55□□□□□ -1.84
SHC1P29353 RNU6-628P-201ENST00000410675 107 ntBASIC3.55□□□□□ -1.84
SHC1P29353 RN7SKP263-201ENST00000411194 309 ntBASIC3.55□□□□□ -1.84
SHC1P29353 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.55□□□□□ -1.84
SHC1P29353 AL450992.3-201ENST00000413192 568 ntBASIC3.55□□□□□ -1.84
SHC1P29353 MORF4L1P6-201ENST00000418771 268 ntBASIC3.55□□□□□ -1.84
SHC1P29353 ZNF885P-201ENST00000420174 1098 ntBASIC3.55□□□□□ -1.84
SHC1P29353 RPF2P1-201ENST00000424137 906 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.55□□□□□ -1.84
SHC1P29353 UBE2D3P1-201ENST00000436669 444 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AC083863.1-201ENST00000438811 231 ntBASIC3.55□□□□□ -1.84
SHC1P29353 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.55□□□□□ -1.84
SHC1P29353 RANP8-201ENST00000444720 713 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.55□□□□□ -1.84
SHC1P29353 AC104978.1-201ENST00000449387 391 ntBASIC3.55□□□□□ -1.84
SHC1P29353 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.55□□□□□ -1.84
SHC1P29353 VN1R105P-201ENST00000486595 910 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.55□□□□□ -1.84
SHC1P29353 AC113347.3-201ENST00000509113 148 ntBASIC3.55□□□□□ -1.84
SHC1P29353 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.55□□□□□ -1.84
SHC1P29353 AC026402.1-201ENST00000513642 170 ntBASIC3.55□□□□□ -1.84
SHC1P29353 HMGB1P1-201ENST00000522557 636 ntBASIC3.55□□□□□ -1.84
SHC1P29353 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.55□□□□□ -1.84
SHC1P29353 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.55□□□□□ -1.84
SHC1P29353 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.55□□□□□ -1.84
SHC1P29353 RFPL1S-203ENST00000539579 330 ntBASIC3.55□□□□□ -1.84
SHC1P29353 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.55□□□□□ -1.84
SHC1P29353 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.55□□□□□ -1.84
SHC1P29353 AC008015.1-201ENST00000555505 465 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AC135628.1-201ENST00000568867 534 ntBASIC3.55□□□□□ -1.84
SHC1P29353 MIR5708-201ENST00000579723 85 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.55□□□□□ -1.84
SHC1P29353 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.55□□□□□ -1.84
SHC1P29353 NF1P5-201ENST00000588287 448 ntBASIC3.55□□□□□ -1.84
SHC1P29353 VN1R85P-201ENST00000601587 426 ntBASIC3.55□□□□□ -1.84
SHC1P29353 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.55□□□□□ -1.84
SHC1P29353 AL606490.9-201ENST00000603331 271 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AL592436.1-201ENST00000605135 558 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AL158042.1-201ENST00000605338 460 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AC107075.1-201ENST00000613695 314 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AC004825.2-201ENST00000616634 455 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AL591424.2-201ENST00000617023 128 ntBASIC3.55□□□□□ -1.84
SHC1P29353 STMN1P1-201ENST00000617809 440 ntBASIC3.55□□□□□ -1.84
SHC1P29353 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SHC1P29353 AC007490.1-201ENST00000624321 703 ntBASIC3.55□□□□□ -1.84
SHC1P29353 MIR6715B-201ENST00000637172 77 ntBASIC3.55□□□□□ -1.84
SHC1P29353 AC103706.2-201ENST00000638080 240 ntBASIC3.55□□□□□ -1.84
SHC1P29353 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHC1P29353 ZNF663P-202ENST00000641770 1131 ntBASIC3.55□□□□□ -1.84
SHC1P29353 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.55□□□□□ -1.84
SHC1P29353 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHC1P29353 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SHC1P29353 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHC1P29353 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms