Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPRMP28827 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PTPRMP28827 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPRMP28827 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPRMP28827 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPRMP28827 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPRMP28827 RNA5SP21-201ENST00000410917 96 ntBASIC4.23□□□□□ -1.73
PTPRMP28827 BX679664.1-201ENST00000434429 253 ntBASIC4.23□□□□□ -1.73
PTPRMP28827 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPRMP28827 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPRMP28827 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.23□□□□□ -1.73
PTPRMP28827 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPRMP28827 AADACP1-206ENST00000561502 1193 ntBASIC4.23□□□□□ -1.73
PTPRMP28827 AL392112.1-201ENST00000605115 829 ntBASIC4.23□□□□□ -1.73
PTPRMP28827 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPRMP28827 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PTPRMP28827 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PTPRMP28827 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPRMP28827 RNA5SP425-201ENST00000410336 112 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 AL662791.1-201ENST00000441992 928 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 UBE2V2P4-201ENST00000447495 259 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPRMP28827 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.22□□□□□ -1.73
PTPRMP28827 AC007566.2-201ENST00000603642 413 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 AC046143.2-201ENST00000609789 160 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 RMST_8.1-201ENST00000610287 165 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PTPRMP28827 AC000123.3-201ENST00000624029 4975 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PTPRMP28827 OR4G2P-202ENST00000641004 1759 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 ADAM3A-203ENST00000461344 2157 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 LINC01355-201ENST00000566551 5444 ntBASIC4.22□□□□□ -1.73
PTPRMP28827 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PTPRMP28827 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PTPRMP28827 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.21□□□□□ -1.74
PTPRMP28827 GCNT6-201ENST00000379591 934 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 AL138827.1-201ENST00000402666 306 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 AL590290.1-201ENST00000405336 380 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 MIR1287-201ENST00000408492 90 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 RPL30P2-201ENST00000414021 291 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRMP28827 RPL7P10-201ENST00000417407 739 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 AL139415.2-201ENST00000431968 163 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 AC009263.1-201ENST00000441193 1239 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 AC010401.1-201ENST00000463867 348 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 OR5H5P-201ENST00000503164 928 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPRMP28827 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPRMP28827 PISRT1-201ENST00000626175 531 ntBASIC4.21□□□□□ -1.74
PTPRMP28827 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRMP28827 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PTPRMP28827 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRMP28827 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRMP28827 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRMP28827 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPRMP28827 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRMP28827 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRMP28827 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPRMP28827 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPRMP28827 GAPDHP39-201ENST00000481866 979 ntBASIC4.2□□□□□ -1.74
PTPRMP28827 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.2□□□□□ -1.74
PTPRMP28827 AC113430.1-201ENST00000506872 718 ntBASIC4.2□□□□□ -1.74
PTPRMP28827 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.2□□□□□ -1.74
PTPRMP28827 AC007318.2-201ENST00000620999 243 ntBASIC4.2□□□□□ -1.74
PTPRMP28827 AC025034.2-201ENST00000623264 286 ntBASIC4.2□□□□□ -1.74
PTPRMP28827 AC092608.2-201ENST00000624427 218 ntBASIC4.2□□□□□ -1.74
PTPRMP28827 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRMP28827 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRMP28827 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPRMP28827 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRMP28827 AL450338.1-201ENST00000407987 512 ntBASIC4.19□□□□□ -1.74
PTPRMP28827 RNU4-26P-201ENST00000410270 107 ntBASIC4.19□□□□□ -1.74
PTPRMP28827 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPRMP28827 RPL21P99-201ENST00000480369 423 ntBASIC4.19□□□□□ -1.74
PTPRMP28827 AP001025.2-201ENST00000490908 477 ntBASIC4.19□□□□□ -1.74
PTPRMP28827 RPS6P4-201ENST00000494693 758 ntBASIC4.19□□□□□ -1.74
PTPRMP28827 AC092436.1-201ENST00000506450 503 ntBASIC4.19□□□□□ -1.74
PTPRMP28827 NTAN1P1-201ENST00000603150 646 ntBASIC4.19□□□□□ -1.74
PTPRMP28827 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRMP28827 CTSLP2-204ENST00000629029 392 ntBASIC4.19□□□□□ -1.74
PTPRMP28827 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPRMP28827 AC020633.1-201ENST00000468439 2247 ntBASIC4.19□□□□□ -1.74
PTPRMP28827 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.19□□□□□ -1.74
PTPRMP28827 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRMP28827 RNU4-44P-201ENST00000363050 141 ntBASIC4.18□□□□□ -1.74
PTPRMP28827 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRMP28827 Y_RNA.466-201ENST00000384294 113 ntBASIC4.18□□□□□ -1.74
PTPRMP28827 AC110754.1-201ENST00000399740 601 ntBASIC4.18□□□□□ -1.74
PTPRMP28827 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRMP28827 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.18□□□□□ -1.74
PTPRMP28827 OR10D4P-201ENST00000525892 951 ntBASIC4.18□□□□□ -1.74
PTPRMP28827 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRMP28827 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
PTPRMP28827 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PTPRMP28827 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRMP28827 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PTPRMP28827 Y_RNA.338-201ENST00000365320 114 ntBASIC4.18□□□□□ -1.74
PTPRMP28827 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.18□□□□□ -1.74
PTPRMP28827 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms