Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.32□□□□□ -1.4
RXRBP28702 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.32□□□□□ -1.4
RXRBP28702 MIR5697-201ENST00000578045 78 ntBASIC6.32□□□□□ -1.4
RXRBP28702 MIR5699-201ENST00000578903 90 ntBASIC6.32□□□□□ -1.4
RXRBP28702 BNIP3P8-201ENST00000597863 560 ntBASIC6.32□□□□□ -1.4
RXRBP28702 RNU6-84P-201ENST00000607737 102 ntBASIC6.32□□□□□ -1.4
RXRBP28702 AL132765.2-201ENST00000610812 351 ntBASIC6.32□□□□□ -1.4
RXRBP28702 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 AL139089.1-201ENST00000620372 975 ntBASIC6.32□□□□□ -1.4
RXRBP28702 AC006840.1-201ENST00000623069 542 ntBASIC6.32□□□□□ -1.4
RXRBP28702 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.32□□□□□ -1.4
RXRBP28702 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 U6.107-201ENST00000637108 79 ntBASIC6.32□□□□□ -1.4
RXRBP28702 AC000095.2-202ENST00000637415 154 ntBASIC6.32□□□□□ -1.4
RXRBP28702 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 ZNF137P-201ENST00000456718 1920 ntBASIC6.32□□□□□ -1.4
RXRBP28702 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RXRBP28702 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
RXRBP28702 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RXRBP28702 OR4G11P-202ENST00000642116 1414 ntBASIC6.32□□□□□ -1.4
RXRBP28702 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC6.32□□□□□ -1.4
RXRBP28702 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 AC138915.3-201ENST00000562908 1389 ntBASIC6.31□□□□□ -1.4
RXRBP28702 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRBP28702 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RXRBP28702 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RXRBP28702 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 Y_RNA.409-201ENST00000383990 98 ntBASIC6.31□□□□□ -1.4
RXRBP28702 Y_RNA.419-201ENST00000384041 102 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AL161909.1-201ENST00000397390 712 ntBASIC6.31□□□□□ -1.4
RXRBP28702 Y_RNA.598-201ENST00000410480 95 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 AC018644.1-201ENST00000429934 551 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 RPS3AP54-201ENST00000435535 734 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC146944.2-203ENST00000502493 354 ntBASIC6.31□□□□□ -1.4
RXRBP28702 CDH12P2-201ENST00000504393 298 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC022447.3-201ENST00000506865 495 ntBASIC6.31□□□□□ -1.4
RXRBP28702 RPL7L1P13-201ENST00000511702 739 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC026412.2-201ENST00000512270 1075 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 AC139495.1-202ENST00000513164 354 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC6.31□□□□□ -1.4
RXRBP28702 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC6.31□□□□□ -1.4
RXRBP28702 ARL2BPP5-201ENST00000523141 481 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.31□□□□□ -1.4
RXRBP28702 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRBP28702 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC6.31□□□□□ -1.4
RXRBP28702 AC087477.6-201ENST00000559595 843 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC007151.1-201ENST00000572774 483 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 AC007363.1-201ENST00000604736 620 ntBASIC6.31□□□□□ -1.4
RXRBP28702 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRBP28702 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 CR392039.5-201ENST00000623201 510 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC015908.5-201ENST00000623289 343 ntBASIC6.31□□□□□ -1.4
RXRBP28702 AC112484.5-201ENST00000624189 228 ntBASIC6.31□□□□□ -1.4
RXRBP28702 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
RXRBP28702 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RXRBP28702 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.31□□□□□ -1.4
RXRBP28702 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRBP28702 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.31□□□□□ -1.4
RXRBP28702 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.31□□□□□ -1.4
RXRBP28702 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
RXRBP28702 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRBP28702 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
RXRBP28702 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRBP28702 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRBP28702 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.3□□□□□ -1.4
RXRBP28702 AL079305.1-201ENST00000623159 3008 ntBASIC6.3□□□□□ -1.4
RXRBP28702 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRBP28702 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RXRBP28702 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRBP28702 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.3□□□□□ -1.4
RXRBP28702 MIR133A2-201ENST00000347538 102 ntBASIC6.3□□□□□ -1.4
RXRBP28702 SNORD56.2-201ENST00000363242 71 ntBASIC6.3□□□□□ -1.4
RXRBP28702 Y_RNA.138-201ENST00000363462 102 ntBASIC6.3□□□□□ -1.4
RXRBP28702 SNORA71.2-201ENST00000364941 134 ntBASIC6.3□□□□□ -1.4
RXRBP28702 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RXRBP28702 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
RXRBP28702 RPL23AP29-201ENST00000397284 453 ntBASIC6.3□□□□□ -1.4
RXRBP28702 RPS3AP36-201ENST00000398190 775 ntBASIC6.3□□□□□ -1.4
RXRBP28702 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRBP28702 AC109780.2-201ENST00000413467 845 ntBASIC6.3□□□□□ -1.4
RXRBP28702 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC6.3□□□□□ -1.4
RXRBP28702 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC6.3□□□□□ -1.4
RXRBP28702 RPL23AP38-201ENST00000423801 469 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms