Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
APOBP04114 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 RPL7P26-201ENST00000333817 754 ntBASIC1.72□□□□□ -2.13
APOBP04114 SNORA36C-201ENST00000384289 132 ntBASIC1.72□□□□□ -2.13
APOBP04114 HMGN1P18-201ENST00000457642 277 ntBASIC1.72□□□□□ -2.13
APOBP04114 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.72□□□□□ -2.13
APOBP04114 AC092436.1-201ENST00000506450 503 ntBASIC1.72□□□□□ -2.13
APOBP04114 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.72□□□□□ -2.13
APOBP04114 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC1.72□□□□□ -2.13
APOBP04114 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.72□□□□□ -2.13
APOBP04114 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
APOBP04114 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
APOBP04114 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
APOBP04114 HMGB3P12-201ENST00000438745 556 ntBASIC1.72□□□□□ -2.13
APOBP04114 RN7SKP210-201ENST00000459176 261 ntBASIC1.72□□□□□ -2.13
APOBP04114 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.72□□□□□ -2.13
APOBP04114 AC005921.1-201ENST00000510589 286 ntBASIC1.72□□□□□ -2.13
APOBP04114 AC005351.1-201ENST00000511152 786 ntBASIC1.72□□□□□ -2.13
APOBP04114 YWHAZP1-201ENST00000556286 722 ntBASIC1.72□□□□□ -2.13
APOBP04114 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC1.72□□□□□ -2.13
APOBP04114 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 AC123768.4-201ENST00000616244 701 ntBASIC1.72□□□□□ -2.13
APOBP04114 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
APOBP04114 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
APOBP04114 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
APOBP04114 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.13
APOBP04114 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.71□□□□□ -2.14
APOBP04114 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
APOBP04114 RNU4-53P-201ENST00000410828 140 ntBASIC1.71□□□□□ -2.14
APOBP04114 HMGN1P5-201ENST00000448591 263 ntBASIC1.71□□□□□ -2.14
APOBP04114 HMGB1P15-201ENST00000453854 435 ntBASIC1.71□□□□□ -2.14
APOBP04114 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.71□□□□□ -2.14
APOBP04114 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.71□□□□□ -2.14
APOBP04114 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
APOBP04114 AC007424.1-203ENST00000554613 687 ntBASIC1.71□□□□□ -2.14
APOBP04114 AC046143.2-201ENST00000609789 160 ntBASIC1.71□□□□□ -2.14
APOBP04114 AC012020.1-201ENST00000624541 1728 ntBASIC1.71□□□□□ -2.14
APOBP04114 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC1.71□□□□□ -2.14
APOBP04114 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC1.71□□□□□ -2.14
APOBP04114 AL139039.1-201ENST00000401900 692 ntBASIC1.71□□□□□ -2.14
APOBP04114 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
APOBP04114 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.71□□□□□ -2.14
APOBP04114 MTCO1P39-201ENST00000426148 480 ntBASIC1.71□□□□□ -2.14
APOBP04114 AC068657.1-201ENST00000520807 306 ntBASIC1.71□□□□□ -2.14
APOBP04114 AC245166.1-201ENST00000521012 253 ntBASIC1.71□□□□□ -2.14
APOBP04114 AC233280.2-201ENST00000603917 1070 ntBASIC1.71□□□□□ -2.14
APOBP04114 AC091903.1-201ENST00000624322 454 ntBASIC1.71□□□□□ -2.14
APOBP04114 AC092608.2-201ENST00000624427 218 ntBASIC1.71□□□□□ -2.14
APOBP04114 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
APOBP04114 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
APOBP04114 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
APOBP04114 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
APOBP04114 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.71□□□□□ -2.14
APOBP04114 LAP3P1-201ENST00000403648 294 ntBASIC1.71□□□□□ -2.14
APOBP04114 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.71□□□□□ -2.14
APOBP04114 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC1.71□□□□□ -2.14
APOBP04114 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC1.71□□□□□ -2.14
APOBP04114 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.71□□□□□ -2.14
APOBP04114 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
APOBP04114 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
APOBP04114 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC1.71□□□□□ -2.14
APOBP04114 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
APOBP04114 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
APOBP04114 RPL7P25-201ENST00000404151 721 ntBASIC1.71□□□□□ -2.14
APOBP04114 MTCO1P51-201ENST00000427672 1060 ntBASIC1.71□□□□□ -2.14
APOBP04114 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.71□□□□□ -2.14
APOBP04114 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.71□□□□□ -2.14
APOBP04114 ASNSP4-201ENST00000511103 447 ntBASIC1.71□□□□□ -2.14
APOBP04114 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.71□□□□□ -2.14
APOBP04114 PISRT1-201ENST00000626175 531 ntBASIC1.71□□□□□ -2.14
APOBP04114 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
APOBP04114 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
APOBP04114 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
APOBP04114 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
APOBP04114 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
APOBP04114 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.7□□□□□ -2.14
APOBP04114 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
APOBP04114 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
APOBP04114 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC1.7□□□□□ -2.14
APOBP04114 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
APOBP04114 SNORD56.3-201ENST00000363507 71 ntBASIC1.7□□□□□ -2.14
APOBP04114 SNORA80E-201ENST00000384744 137 ntBASIC1.7□□□□□ -2.14
APOBP04114 RNA5SP213-201ENST00000391031 106 ntBASIC1.7□□□□□ -2.14
APOBP04114 RNU6-482P-201ENST00000391068 107 ntBASIC1.7□□□□□ -2.14
APOBP04114 RNU4-26P-201ENST00000410270 107 ntBASIC1.7□□□□□ -2.14
APOBP04114 RPL23AP4-201ENST00000427757 463 ntBASIC1.7□□□□□ -2.14
APOBP04114 AC018634.1-201ENST00000437554 401 ntBASIC1.7□□□□□ -2.14
APOBP04114 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.7□□□□□ -2.14
APOBP04114 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC1.7□□□□□ -2.14
APOBP04114 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
APOBP04114 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
APOBP04114 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
APOBP04114 MIR489-201ENST00000384923 84 ntBASIC1.7□□□□□ -2.14
APOBP04114 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms