Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC245096.1-201ENST00000413104 546 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.71□□□□□ -1.5
PDGFAP04085 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFAP04085 CYCSP52-201ENST00000422857 310 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC092651.1-201ENST00000426110 312 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC005077.1-201ENST00000449226 375 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 PPIAP3-201ENST00000450588 505 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFAP04085 AC079168.1-201ENST00000458741 345 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFAP04085 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFAP04085 AC106872.2-201ENST00000494303 480 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC006499.3-201ENST00000506077 748 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC104806.1-201ENST00000508720 308 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFAP04085 HMGN1P9-201ENST00000515212 298 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC097486.1-201ENST00000515331 210 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 SNORA70.11-201ENST00000515987 138 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 SNORA70.13-201ENST00000516116 138 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 RNU6-1092P-201ENST00000516955 87 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 Y_RNA.710-201ENST00000516975 110 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 RNU6-988P-201ENST00000519081 107 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC090136.1-201ENST00000520009 240 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC022634.1-201ENST00000520765 532 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 SETP7-201ENST00000552169 453 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 IMMP1LP2-201ENST00000552954 492 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFAP04085 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFAP04085 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFAP04085 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFAP04085 MIR5583-1-201ENST00000580941 59 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 MIR5690-201ENST00000583739 73 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC092747.3-201ENST00000603769 301 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 MIR6809-201ENST00000612189 116 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AL627230.1-201ENST00000613077 211 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.71□□□□□ -1.5
PDGFAP04085 RNA5SP439-201ENST00000617595 124 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AL357559.1-201ENST00000622228 274 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AC135068.12-201ENST00000637370 931 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 OR52H1-202ENST00000641796 1061 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFAP04085 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFAP04085 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.71□□□□□ -1.5
PDGFAP04085 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFAP04085 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFAP04085 AC110373.1-201ENST00000505994 3505 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
PDGFAP04085 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.71□□□□□ -1.5
PDGFAP04085 API5P2-201ENST00000397055 1498 ntBASIC5.71□□□□□ -1.5
PDGFAP04085 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFAP04085 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 AC020633.1-201ENST00000468439 2247 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.7□□□□□ -1.5
PDGFAP04085 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PDGFAP04085 RNU1-150P-201ENST00000362491 162 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 RNU6-1252P-201ENST00000363054 104 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PDGFAP04085 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
PDGFAP04085 Y_RNA.576-201ENST00000384781 102 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PDGFAP04085 RNU6-1304P-201ENST00000411374 106 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFAP04085 AC114491.1-201ENST00000416095 246 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 RPL7P46-201ENST00000425129 740 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.7□□□□□ -1.5
PDGFAP04085 OR3D1P-201ENST00000438288 955 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFAP04085 PPIAP10-201ENST00000438675 458 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AF228730.2-201ENST00000438784 848 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AC064862.4-201ENST00000442180 334 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFAP04085 CYCSP51-201ENST00000443545 318 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFAP04085 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFAP04085 MTND5P22-201ENST00000458380 195 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 Y_RNA.653-201ENST00000459091 95 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AC135721.1-201ENST00000497954 479 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFAP04085 MTCO3P44-201ENST00000510977 541 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AC090958.1-201ENST00000511122 351 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.7□□□□□ -1.5
PDGFAP04085 RNU6-256P-201ENST00000516747 97 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 RNA5SP454-201ENST00000517231 127 ntBASIC5.7□□□□□ -1.5
PDGFAP04085 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFAP04085 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.7□□□□□ -1.5
PDGFAP04085 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms