Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNU6-77P-201ENST00000410554 91 ntBASIC3.96□□□□□ -1.78
VTNP04004 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.96□□□□□ -1.78
VTNP04004 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.96□□□□□ -1.78
VTNP04004 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.96□□□□□ -1.78
VTNP04004 SAGE2P-201ENST00000420011 2126 ntBASIC3.96□□□□□ -1.78
VTNP04004 ATP5JP1-201ENST00000431631 322 ntBASIC3.96□□□□□ -1.78
VTNP04004 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.96□□□□□ -1.78
VTNP04004 RPS4XP10-201ENST00000465034 731 ntBASIC3.96□□□□□ -1.78
VTNP04004 AC025518.1-201ENST00000479856 347 ntBASIC3.96□□□□□ -1.78
VTNP04004 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.96□□□□□ -1.78
VTNP04004 AC008494.2-201ENST00000514544 370 ntBASIC3.96□□□□□ -1.78
VTNP04004 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.96□□□□□ -1.78
VTNP04004 RN7SKP265-201ENST00000516448 223 ntBASIC3.96□□□□□ -1.78
VTNP04004 AF186190.1-201ENST00000517470 480 ntBASIC3.96□□□□□ -1.78
VTNP04004 AC022790.1-201ENST00000522872 204 ntBASIC3.96□□□□□ -1.78
VTNP04004 MTCO3P15-201ENST00000526563 574 ntBASIC3.96□□□□□ -1.78
VTNP04004 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.96□□□□□ -1.78
VTNP04004 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.96□□□□□ -1.78
VTNP04004 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.96□□□□□ -1.78
VTNP04004 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.96□□□□□ -1.78
VTNP04004 AC017100.2-201ENST00000584628 355 ntBASIC3.96□□□□□ -1.78
VTNP04004 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.96□□□□□ -1.78
VTNP04004 AC009237.15-201ENST00000610252 501 ntBASIC3.96□□□□□ -1.78
VTNP04004 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.96□□□□□ -1.78
VTNP04004 AC140725.3-201ENST00000616193 880 ntBASIC3.96□□□□□ -1.78
VTNP04004 AC069209.1-201ENST00000619282 651 ntBASIC3.96□□□□□ -1.78
VTNP04004 MTND4P10-201ENST00000446199 1363 ntBASIC3.96□□□□□ -1.78
VTNP04004 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
VTNP04004 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VTNP04004 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.96□□□□□ -1.78
VTNP04004 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VTNP04004 AC099786.3-201ENST00000565735 1410 ntBASIC3.95□□□□□ -1.78
VTNP04004 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VTNP04004 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VTNP04004 AC138393.1-206ENST00000540997 1886 ntBASIC3.95□□□□□ -1.78
VTNP04004 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTNP04004 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.95□□□□□ -1.78
VTNP04004 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VTNP04004 MTCO1P6-201ENST00000481192 1384 ntBASIC3.95□□□□□ -1.78
VTNP04004 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTNP04004 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTNP04004 RNA5SP50-201ENST00000363731 107 ntBASIC3.95□□□□□ -1.78
VTNP04004 RNU4-68P-201ENST00000364314 141 ntBASIC3.95□□□□□ -1.78
VTNP04004 Y_RNA.472-201ENST00000384322 102 ntBASIC3.95□□□□□ -1.78
VTNP04004 RNU4-22P-201ENST00000411058 166 ntBASIC3.95□□□□□ -1.78
VTNP04004 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.95□□□□□ -1.78
VTNP04004 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.95□□□□□ -1.78
VTNP04004 BX842559.1-201ENST00000419615 532 ntBASIC3.95□□□□□ -1.78
VTNP04004 RPS12P5-201ENST00000423449 371 ntBASIC3.95□□□□□ -1.78
VTNP04004 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.95□□□□□ -1.78
VTNP04004 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.95□□□□□ -1.78
VTNP04004 ELOCP13-201ENST00000443934 329 ntBASIC3.95□□□□□ -1.78
VTNP04004 HMGB3P6-201ENST00000444896 598 ntBASIC3.95□□□□□ -1.78
VTNP04004 RPL7P31-201ENST00000450192 724 ntBASIC3.95□□□□□ -1.78
VTNP04004 ZNF886P-201ENST00000450781 723 ntBASIC3.95□□□□□ -1.78
VTNP04004 RPL26P28-201ENST00000451325 435 ntBASIC3.95□□□□□ -1.78
VTNP04004 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.95□□□□□ -1.78
VTNP04004 AC099563.1-201ENST00000456086 418 ntBASIC3.95□□□□□ -1.78
VTNP04004 NAP1L1P3-201ENST00000462291 880 ntBASIC3.95□□□□□ -1.78
VTNP04004 AC069528.1-202ENST00000482888 637 ntBASIC3.95□□□□□ -1.78
VTNP04004 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.95□□□□□ -1.78
VTNP04004 WBP1LP4-201ENST00000505043 344 ntBASIC3.95□□□□□ -1.78
VTNP04004 AC004069.2-201ENST00000505438 1114 ntBASIC3.95□□□□□ -1.78
VTNP04004 HNRNPKP5-201ENST00000515300 253 ntBASIC3.95□□□□□ -1.78
VTNP04004 RNU6-311P-201ENST00000516224 102 ntBASIC3.95□□□□□ -1.78
VTNP04004 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.95□□□□□ -1.78
VTNP04004 AC026407.1-201ENST00000518369 204 ntBASIC3.95□□□□□ -1.78
VTNP04004 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.95□□□□□ -1.78
VTNP04004 IGJP1-201ENST00000522682 475 ntBASIC3.95□□□□□ -1.78
VTNP04004 DEFB130C-202ENST00000530001 230 ntBASIC3.95□□□□□ -1.78
VTNP04004 AC044913.1-201ENST00000557200 430 ntBASIC3.95□□□□□ -1.78
VTNP04004 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.95□□□□□ -1.78
VTNP04004 AC090312.2-201ENST00000582687 378 ntBASIC3.95□□□□□ -1.78
VTNP04004 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.95□□□□□ -1.78
VTNP04004 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.95□□□□□ -1.78
VTNP04004 AC002487.1-201ENST00000604565 994 ntBASIC3.95□□□□□ -1.78
VTNP04004 AL008729.2-201ENST00000606393 473 ntBASIC3.95□□□□□ -1.78
VTNP04004 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VTNP04004 AC010975.3-201ENST00000618727 978 ntBASIC3.95□□□□□ -1.78
VTNP04004 RMST_9.1-201ENST00000619945 193 ntBASIC3.95□□□□□ -1.78
VTNP04004 AC092608.3-201ENST00000625017 386 ntBASIC3.95□□□□□ -1.78
VTNP04004 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.95□□□□□ -1.78
VTNP04004 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.95□□□□□ -1.78
VTNP04004 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.95□□□□□ -1.78
VTNP04004 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.95□□□□□ -1.78
VTNP04004 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
VTNP04004 AL355578.1-201ENST00000607405 1328 ntBASIC3.95□□□□□ -1.78
VTNP04004 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
VTNP04004 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VTNP04004 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.94□□□□□ -1.78
VTNP04004 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VTNP04004 RNU1-87P-201ENST00000363727 170 ntBASIC3.94□□□□□ -1.78
VTNP04004 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
VTNP04004 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.94□□□□□ -1.78
VTNP04004 AL391219.1-201ENST00000422570 483 ntBASIC3.94□□□□□ -1.78
VTNP04004 AC097713.2-201ENST00000430199 356 ntBASIC3.94□□□□□ -1.78
VTNP04004 MOB1AP1-201ENST00000430903 535 ntBASIC3.94□□□□□ -1.78
VTNP04004 RPL21P110-201ENST00000433345 446 ntBASIC3.94□□□□□ -1.78
VTNP04004 ATP5HP2-201ENST00000433885 485 ntBASIC3.94□□□□□ -1.78
VTNP04004 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms