Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF40O75150 AC144530.1-201ENST00000452862 555 ntBASIC6.9□□□□□ -1.3
RNF40O75150 AL138752.1-201ENST00000452964 351 ntBASIC6.9□□□□□ -1.3
RNF40O75150 RPL21P8-201ENST00000465083 535 ntBASIC6.9□□□□□ -1.3
RNF40O75150 AC006967.1-201ENST00000467608 589 ntBASIC6.9□□□□□ -1.3
RNF40O75150 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF40O75150 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.9□□□□□ -1.3
RNF40O75150 IGKV2-19-201ENST00000518132 283 ntBASIC6.9□□□□□ -1.3
RNF40O75150 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF40O75150 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF40O75150 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF40O75150 COX6CP3-201ENST00000580869 223 ntBASIC6.9□□□□□ -1.3
RNF40O75150 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF40O75150 AC025857.2-201ENST00000602711 238 ntBASIC6.9□□□□□ -1.3
RNF40O75150 U1.25-201ENST00000614085 162 ntBASIC6.9□□□□□ -1.3
RNF40O75150 U1.34-201ENST00000618578 162 ntBASIC6.9□□□□□ -1.3
RNF40O75150 U1.31-201ENST00000620022 160 ntBASIC6.9□□□□□ -1.3
RNF40O75150 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF40O75150 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF40O75150 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF40O75150 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.9□□□□□ -1.31
RNF40O75150 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF40O75150 AC016583.1-201ENST00000624221 2431 ntBASIC6.9□□□□□ -1.31
RNF40O75150 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RNF40O75150 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RNF40O75150 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
RNF40O75150 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
RNF40O75150 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.9□□□□□ -1.31
RNF40O75150 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF40O75150 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF40O75150 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
RNF40O75150 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 AL445437.1-201ENST00000623157 3087 ntBASIC6.89□□□□□ -1.31
RNF40O75150 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 RNU1-85P-201ENST00000364127 164 ntBASIC6.89□□□□□ -1.31
RNF40O75150 SNORA23-201ENST00000365128 182 ntBASIC6.89□□□□□ -1.31
RNF40O75150 RNA5SP279-201ENST00000365513 117 ntBASIC6.89□□□□□ -1.31
RNF40O75150 RN7SKP269-201ENST00000365545 319 ntBASIC6.89□□□□□ -1.31
RNF40O75150 RNU6-1027P-201ENST00000383998 107 ntBASIC6.89□□□□□ -1.31
RNF40O75150 PRRC2CP1-201ENST00000404428 159 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AL024474.1-201ENST00000404655 591 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF40O75150 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF40O75150 AL158071.1-201ENST00000430315 461 ntBASIC6.89□□□□□ -1.31
RNF40O75150 RPL23AP69-201ENST00000431134 458 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF40O75150 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.89□□□□□ -1.31
RNF40O75150 AL353662.1-201ENST00000439099 327 ntBASIC6.89□□□□□ -1.31
RNF40O75150 COL11A2P1-205ENST00000441798 676 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC6.89□□□□□ -1.31
RNF40O75150 RPS7P3-201ENST00000443360 580 ntBASIC6.89□□□□□ -1.31
RNF40O75150 RPS3AP12-201ENST00000443616 753 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC016696.1-201ENST00000446949 318 ntBASIC6.89□□□□□ -1.31
RNF40O75150 MTCO3P8-201ENST00000453691 755 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF40O75150 LINC01399-202ENST00000458450 244 ntBASIC6.89□□□□□ -1.31
RNF40O75150 snoU13.8-201ENST00000458890 104 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC094085.1-201ENST00000468914 584 ntBASIC6.89□□□□□ -1.31
RNF40O75150 RN7SL187P-201ENST00000495587 303 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC112484.3-201ENST00000505910 329 ntBASIC6.89□□□□□ -1.31
RNF40O75150 HMGN1P16-201ENST00000508308 283 ntBASIC6.89□□□□□ -1.31
RNF40O75150 TBCAP3-201ENST00000512475 312 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF40O75150 SNORA40.15-201ENST00000516884 107 ntBASIC6.89□□□□□ -1.31
RNF40O75150 RNU6-897P-201ENST00000517135 105 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF40O75150 AC100784.1-201ENST00000522790 310 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF40O75150 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF40O75150 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.89□□□□□ -1.31
RNF40O75150 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF40O75150 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF40O75150 AC007494.1-201ENST00000562293 760 ntBASIC6.89□□□□□ -1.31
RNF40O75150 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF40O75150 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 MIR6721-201ENST00000617181 87 ntBASIC6.89□□□□□ -1.31
RNF40O75150 AC010325.3-201ENST00000641084 394 ntBASIC6.89□□□□□ -1.31
RNF40O75150 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RNF40O75150 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF40O75150 AC090220.1-201ENST00000593078 1699 ntBASIC6.89□□□□□ -1.31
RNF40O75150 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF40O75150 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.89□□□□□ -1.31
RNF40O75150 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF40O75150 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
RNF40O75150 AC015799.1-201ENST00000622996 3122 ntBASIC6.89□□□□□ -1.31
RNF40O75150 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.89□□□□□ -1.31
RNF40O75150 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.89□□□□□ -1.31
RNF40O75150 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RNF40O75150 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
RNF40O75150 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF40O75150 AC092070.2-203ENST00000598377 3644 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms