Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.45□□□□□ -1.86
HCN1O60741 snoU13.7-201ENST00000459220 104 ntBASIC3.45□□□□□ -1.86
HCN1O60741 U8.18-201ENST00000459285 133 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AL049829.1-201ENST00000465411 156 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.45□□□□□ -1.86
HCN1O60741 AC034236.1-201ENST00000469891 373 ntBASIC3.45□□□□□ -1.86
HCN1O60741 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HCN1O60741 AC015908.1-201ENST00000478739 476 ntBASIC3.45□□□□□ -1.86
HCN1O60741 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN1O60741 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.45□□□□□ -1.86
HCN1O60741 HMGN1P15-201ENST00000513870 295 ntBASIC3.45□□□□□ -1.86
HCN1O60741 SCARNA14-201ENST00000516903 136 ntBASIC3.45□□□□□ -1.86
HCN1O60741 RN7SKP96-201ENST00000516948 297 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN1O60741 AF279873.1-201ENST00000523393 313 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.45□□□□□ -1.86
HCN1O60741 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HCN1O60741 PDCL2P2-201ENST00000533651 189 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.45□□□□□ -1.86
HCN1O60741 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN1O60741 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.45□□□□□ -1.86
HCN1O60741 MIR3186-201ENST00000577404 85 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AC090616.5-202ENST00000582111 297 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.45□□□□□ -1.86
HCN1O60741 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.45□□□□□ -1.86
HCN1O60741 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN1O60741 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.45□□□□□ -1.86
HCN1O60741 AC022146.1-201ENST00000595307 847 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.45□□□□□ -1.86
HCN1O60741 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN1O60741 AC091488.1-201ENST00000604239 660 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.45□□□□□ -1.86
HCN1O60741 AL359535.1-201ENST00000612100 1087 ntBASIC3.45□□□□□ -1.86
HCN1O60741 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.45□□□□□ -1.86
HCN1O60741 AC078880.5-201ENST00000617845 421 ntBASIC3.45□□□□□ -1.86
HCN1O60741 XIST_intron.1-201ENST00000619444 68 ntBASIC3.45□□□□□ -1.86
HCN1O60741 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HCN1O60741 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HCN1O60741 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.45□□□□□ -1.86
HCN1O60741 PWAR6-201ENST00000552334 4618 ntBASIC3.45□□□□□ -1.86
HCN1O60741 ZNF849P-201ENST00000594711 1566 ntBASIC3.45□□□□□ -1.86
HCN1O60741 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HCN1O60741 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HCN1O60741 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
HCN1O60741 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN1O60741 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN1O60741 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN1O60741 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.44□□□□□ -1.86
HCN1O60741 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN1O60741 AC024560.2-201ENST00000507981 1497 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AC138915.3-201ENST00000562908 1389 ntBASIC3.44□□□□□ -1.86
HCN1O60741 RNA5SP124-201ENST00000362739 110 ntBASIC3.44□□□□□ -1.86
HCN1O60741 SNORA7.2-201ENST00000364446 145 ntBASIC3.44□□□□□ -1.86
HCN1O60741 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HCN1O60741 RPL21P17-201ENST00000397467 475 ntBASIC3.44□□□□□ -1.86
HCN1O60741 RNU6-77P-201ENST00000410554 91 ntBASIC3.44□□□□□ -1.86
HCN1O60741 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.44□□□□□ -1.86
HCN1O60741 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN1O60741 TCEA1P2-201ENST00000420496 906 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC3.44□□□□□ -1.86
HCN1O60741 AL451062.2-201ENST00000427515 271 ntBASIC3.44□□□□□ -1.86
HCN1O60741 OR4F13P-201ENST00000428478 931 ntBASIC3.44□□□□□ -1.86
HCN1O60741 USP9YP31-201ENST00000431405 881 ntBASIC3.44□□□□□ -1.86
HCN1O60741 Z74696.2-201ENST00000436514 498 ntBASIC3.44□□□□□ -1.86
HCN1O60741 RAB11AP1-201ENST00000442978 646 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN1O60741 AC006480.1-201ENST00000449887 378 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.44□□□□□ -1.86
HCN1O60741 BX248409.1-201ENST00000455497 255 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN1O60741 AC022034.3-201ENST00000471393 478 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AL049830.2-201ENST00000480072 201 ntBASIC3.44□□□□□ -1.86
HCN1O60741 NAMPTP2-201ENST00000505629 1115 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN1O60741 TMEM248P1-201ENST00000510579 951 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.44□□□□□ -1.86
HCN1O60741 RNU6-416P-201ENST00000516265 103 ntBASIC3.44□□□□□ -1.86
HCN1O60741 RNU1-95P-201ENST00000516357 160 ntBASIC3.44□□□□□ -1.86
HCN1O60741 RNU1-128P-201ENST00000516704 160 ntBASIC3.44□□□□□ -1.86
HCN1O60741 IGJP1-201ENST00000522682 475 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HCN1O60741 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.44□□□□□ -1.86
HCN1O60741 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN1O60741 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN1O60741 MIR4738-201ENST00000579134 87 ntBASIC3.44□□□□□ -1.86
HCN1O60741 VN1R88P-201ENST00000596787 292 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AC011468.4-201ENST00000603942 409 ntBASIC3.44□□□□□ -1.86
HCN1O60741 MIR8058-201ENST00000615737 89 ntBASIC3.44□□□□□ -1.86
HCN1O60741 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HCN1O60741 AL109659.3-201ENST00000624985 950 ntBASIC3.44□□□□□ -1.86
HCN1O60741 AC112200.1-201ENST00000625015 234 ntBASIC3.44□□□□□ -1.86
HCN1O60741 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN1O60741 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN1O60741 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN1O60741 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN1O60741 XPOTP1-201ENST00000443317 2398 ntBASIC3.44□□□□□ -1.86
HCN1O60741 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HCN1O60741 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN1O60741 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HCN1O60741 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms