Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MTCO2P19-201ENST00000427513 598 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM38O00635 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM38O00635 VN1R10P-201ENST00000447106 875 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 TRGVB-201ENST00000453257 471 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 RPL37P6-202ENST00000464216 403 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 RN7SL817P-201ENST00000480777 288 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 RN7SL558P-201ENST00000497468 299 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
TRIM38O00635 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 AC114981.1-201ENST00000503897 678 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 AC091868.1-201ENST00000508746 304 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM38O00635 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
TRIM38O00635 Y_RNA.719-201ENST00000517156 106 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM38O00635 OR5BC1P-201ENST00000529327 739 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM38O00635 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 ISCA1P3-201ENST00000577104 373 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 MIR4458-201ENST00000578872 75 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 RN7SL176P-201ENST00000580352 264 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 MIR4999-201ENST00000585029 91 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 RSL24D1P11-201ENST00000591045 491 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 AL121932.1-201ENST00000605542 214 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 AC024941.1-201ENST00000612250 334 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 AC000123.2-201ENST00000623124 461 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM38O00635 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TRIM38O00635 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM38O00635 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM38O00635 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM38O00635 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
TRIM38O00635 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRIM38O00635 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
TRIM38O00635 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 OR10J6P-201ENST00000289731 930 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 RNA5SP447-201ENST00000363749 119 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRIM38O00635 AL049693.1-201ENST00000402760 611 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 RNA5SP146-201ENST00000410743 123 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 ELOCP19-201ENST00000411919 318 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 CEACAMP8-201ENST00000413902 580 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM38O00635 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM38O00635 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM38O00635 MTND4P20-201ENST00000424125 869 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM38O00635 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.67□□□□□ -1.66
TRIM38O00635 AL121601.2-201ENST00000438019 707 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 RPS24P1-201ENST00000438550 371 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AL357520.1-201ENST00000441557 453 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 MTND5P2-201ENST00000442927 1142 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AL606662.1-201ENST00000445763 553 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 RPL39P6-201ENST00000448289 150 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM38O00635 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM38O00635 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
TRIM38O00635 OR4G11P-201ENST00000492842 939 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM38O00635 RNY4P37-201ENST00000516225 96 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 OR5G4P-201ENST00000525251 760 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 TOMM20P2-201ENST00000540082 421 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.67□□□□□ -1.66
TRIM38O00635 AC092470.1-201ENST00000546187 132 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 ELOCP32-201ENST00000548625 324 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 CENPUP2-201ENST00000555897 1186 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.67□□□□□ -1.66
TRIM38O00635 MIR5699-201ENST00000578903 90 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM38O00635 AL356218.2-201ENST00000605264 187 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 COX6CP4-201ENST00000605798 228 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AC091979.2-201ENST00000607514 214 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AF250324.2-201ENST00000608299 610 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AL159169.3-201ENST00000608871 561 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AC072039.2-201ENST00000608883 439 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AL139418.1-201ENST00000613613 177 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AL136981.2-201ENST00000617319 734 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
TRIM38O00635 AC091931.1-201ENST00000623488 728 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 AC010608.2-201ENST00000624830 470 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 OR52H1-202ENST00000641796 1061 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM38O00635 OR5BR1P-201ENST00000524992 1330 ntBASIC4.67□□□□□ -1.66
TRIM38O00635 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
TRIM38O00635 AL442639.1-201ENST00000625030 1899 ntBASIC4.66□□□□□ -1.66
TRIM38O00635 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms