Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.89□□□□□ -1.79
RTCAO00442 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.89□□□□□ -1.79
RTCAO00442 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.89□□□□□ -1.79
RTCAO00442 MIR4474-201ENST00000579189 78 ntBASIC3.89□□□□□ -1.79
RTCAO00442 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTCAO00442 MIR5684-201ENST00000585074 65 ntBASIC3.89□□□□□ -1.79
RTCAO00442 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTCAO00442 AC244505.7-201ENST00000599675 272 ntBASIC3.89□□□□□ -1.79
RTCAO00442 DUXAP10-204ENST00000612052 616 ntBASIC3.89□□□□□ -1.79
RTCAO00442 VN1R74P-201ENST00000613259 503 ntBASIC3.89□□□□□ -1.79
RTCAO00442 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.89□□□□□ -1.79
RTCAO00442 AC123767.1-202ENST00000620407 817 ntBASIC3.89□□□□□ -1.79
RTCAO00442 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.89□□□□□ -1.79
RTCAO00442 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RTCAO00442 AP005264.7-201ENST00000625003 745 ntBASIC3.89□□□□□ -1.79
RTCAO00442 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTCAO00442 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RTCAO00442 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.89□□□□□ -1.79
RTCAO00442 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTCAO00442 AC244517.1-201ENST00000606030 2086 ntBASIC3.89□□□□□ -1.79
RTCAO00442 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.89□□□□□ -1.79
RTCAO00442 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTCAO00442 AC111188.2-201ENST00000529697 1387 ntBASIC3.89□□□□□ -1.79
RTCAO00442 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTCAO00442 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.88□□□□□ -1.79
RTCAO00442 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.88□□□□□ -1.79
RTCAO00442 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
RTCAO00442 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.88□□□□□ -1.79
RTCAO00442 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.88□□□□□ -1.79
RTCAO00442 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.88□□□□□ -1.79
RTCAO00442 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
RTCAO00442 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTCAO00442 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.88□□□□□ -1.79
RTCAO00442 RNU6-1249P-201ENST00000363237 111 ntBASIC3.88□□□□□ -1.79
RTCAO00442 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTCAO00442 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.88□□□□□ -1.79
RTCAO00442 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.88□□□□□ -1.79
RTCAO00442 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.88□□□□□ -1.79
RTCAO00442 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.88□□□□□ -1.79
RTCAO00442 OSTCP5-201ENST00000425293 453 ntBASIC3.88□□□□□ -1.79
RTCAO00442 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.88□□□□□ -1.79
RTCAO00442 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.88□□□□□ -1.79
RTCAO00442 AL133477.1-201ENST00000457472 514 ntBASIC3.88□□□□□ -1.79
RTCAO00442 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.88□□□□□ -1.79
RTCAO00442 RPL29P14-201ENST00000495837 428 ntBASIC3.88□□□□□ -1.79
RTCAO00442 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTCAO00442 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.88□□□□□ -1.79
RTCAO00442 AC110760.3-202ENST00000515177 371 ntBASIC3.88□□□□□ -1.79
RTCAO00442 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.88□□□□□ -1.79
RTCAO00442 IGKV2-38-201ENST00000517443 247 ntBASIC3.88□□□□□ -1.79
RTCAO00442 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTCAO00442 AP000790.1-201ENST00000528891 737 ntBASIC3.88□□□□□ -1.79
RTCAO00442 HIGD1AP5-201ENST00000529959 259 ntBASIC3.88□□□□□ -1.79
RTCAO00442 LRRC6P1-201ENST00000532188 885 ntBASIC3.88□□□□□ -1.79
RTCAO00442 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTCAO00442 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.88□□□□□ -1.79
RTCAO00442 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.88□□□□□ -1.79
RTCAO00442 AC025627.2-201ENST00000576220 160 ntBASIC3.88□□□□□ -1.79
RTCAO00442 SNORD84-203ENST00000584275 78 ntBASIC3.88□□□□□ -1.79
RTCAO00442 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.88□□□□□ -1.79
RTCAO00442 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
RTCAO00442 AC083809.1-201ENST00000615051 472 ntBASIC3.88□□□□□ -1.79
RTCAO00442 AL512506.2-201ENST00000624472 458 ntBASIC3.88□□□□□ -1.79
RTCAO00442 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.88□□□□□ -1.79
RTCAO00442 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.88□□□□□ -1.79
RTCAO00442 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RTCAO00442 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTCAO00442 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTCAO00442 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTCAO00442 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.88□□□□□ -1.79
RTCAO00442 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.87□□□□□ -1.79
RTCAO00442 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTCAO00442 AC005183.1-201ENST00000603687 1979 ntBASIC3.87□□□□□ -1.79
RTCAO00442 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RTCAO00442 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
RTCAO00442 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTCAO00442 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RTCAO00442 OR4A15-201ENST00000314706 1035 ntBASIC3.87□□□□□ -1.79
RTCAO00442 AL121657.1-201ENST00000327215 531 ntBASIC3.87□□□□□ -1.79
RTCAO00442 RNU6-989P-201ENST00000362756 107 ntBASIC3.87□□□□□ -1.79
RTCAO00442 RNA5SP130-201ENST00000364431 114 ntBASIC3.87□□□□□ -1.79
RTCAO00442 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
RTCAO00442 GSTA8P-201ENST00000404253 637 ntBASIC3.87□□□□□ -1.79
RTCAO00442 AL139098.1-201ENST00000407291 389 ntBASIC3.87□□□□□ -1.79
RTCAO00442 HSPE1P12-201ENST00000412576 301 ntBASIC3.87□□□□□ -1.79
RTCAO00442 AC099677.1-201ENST00000420575 175 ntBASIC3.87□□□□□ -1.79
RTCAO00442 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.87□□□□□ -1.79
RTCAO00442 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.87□□□□□ -1.79
RTCAO00442 MTCO2P23-201ENST00000425216 680 ntBASIC3.87□□□□□ -1.79
RTCAO00442 OR5BE1P-201ENST00000425977 939 ntBASIC3.87□□□□□ -1.79
RTCAO00442 ARF4P2-201ENST00000430209 526 ntBASIC3.87□□□□□ -1.79
RTCAO00442 AC234064.1-201ENST00000436312 247 ntBASIC3.87□□□□□ -1.79
RTCAO00442 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.87□□□□□ -1.79
RTCAO00442 EXOSC3P1-201ENST00000448649 500 ntBASIC3.87□□□□□ -1.79
RTCAO00442 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.87□□□□□ -1.79
RTCAO00442 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.87□□□□□ -1.79
RTCAO00442 RPL38P1-201ENST00000460914 211 ntBASIC3.87□□□□□ -1.79
RTCAO00442 RPS23P7-201ENST00000466210 444 ntBASIC3.87□□□□□ -1.79
RTCAO00442 RPL7P9-201ENST00000468715 747 ntBASIC3.87□□□□□ -1.79
RTCAO00442 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms