Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU6-1003P-201ENST00000517099 105 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 DUXAP2-201ENST00000519198 589 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC021006.3-201ENST00000530771 192 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 BGLT3-201ENST00000564523 994 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 EIF1P4-201ENST00000572664 335 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC087283.1-201ENST00000604029 1074 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC112191.3-201ENST00000604371 277 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 BCRP9-201ENST00000605312 388 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC008121.2-201ENST00000614647 523 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC022106.2-201ENST00000620114 757 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC015871.5-202ENST00000623252 701 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AC104118.1-201ENST00000607625 1589 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 AL049780.3-201ENST00000624612 1583 ntBASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
PCDHGA3Q9Y5H0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 SNORD115.1-201ENST00000391109 76 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 RN7SKP16-201ENST00000410180 299 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AIMP1P1-201ENST00000418670 937 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 RHOT1P3-201ENST00000436571 331 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 CYCSP24-201ENST00000445119 316 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 GDI2P2-201ENST00000445131 608 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 RPL7P52-201ENST00000449200 742 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 RPS29P33-201ENST00000456717 146 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 IGKV1-32-201ENST00000519290 311 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 OR8L1P-201ENST00000534005 955 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC022880.1-201ENST00000534017 973 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 SETP2-201ENST00000553886 926 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AP001094.1-201ENST00000579805 193 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 MIR3682-201ENST00000581338 84 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC234771.5-201ENST00000600161 514 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC008782.1-201ENST00000603386 430 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 MEMO1P5-201ENST00000604810 406 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC091965.4-201ENST00000607691 587 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC103710.1-201ENST00000610003 901 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC138749.5-201ENST00000611461 208 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AP001506.1-201ENST00000615444 211 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 uc_338.18-201ENST00000615451 175 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AC116165.2-201ENST00000616705 206 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC01109-201ENST00000603837 3081 ntBASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
PCDHGA3Q9Y5H0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC013442.1-201ENST00000397347 228 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 RNU2-15P-201ENST00000410692 191 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 Y_RNA.619-201ENST00000410951 90 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 USP9YP14-201ENST00000430663 563 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 RPL22P17-201ENST00000438729 315 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 AC146507.1-201ENST00000468335 354 ntBASIC4.88□□□□□ -1.63
PCDHGA3Q9Y5H0 RPL21P103-201ENST00000479921 488 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms