Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CKS1BP1-201ENST00000555221 240 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC087499.8-201ENST00000578406 226 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 RN7SL703P-201ENST00000578485 302 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC067959.1-201ENST00000604334 379 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL513477.2-201ENST00000607858 568 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC092650.2-201ENST00000619984 902 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 CR381572.1-201ENST00000625098 102 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AL590396.2-201ENST00000636511 1041 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 MTCO1P6-201ENST00000481192 1384 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 AP004289.2-201ENST00000444413 1457 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.19□□□□□ -1.9
RHBDD3Q9Y3P4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 EI24P2-201ENST00000397776 1076 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 RAD23BP2-201ENST00000416003 1207 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 HMGB3P20-201ENST00000417997 600 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AL139247.1-201ENST00000422768 325 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AC091390.1-201ENST00000433904 331 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 HMGB1P15-201ENST00000453854 435 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AC103987.1-201ENST00000473394 348 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 RPL23AP44-201ENST00000482216 473 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 MTCYBP37-201ENST00000510642 1133 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 HIGD1AP6-201ENST00000521833 279 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 OR7E13P-201ENST00000526052 910 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 MTATP6P25-201ENST00000574491 261 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AP001029.3-201ENST00000588063 596 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 RNVU1-4-201ENST00000612985 164 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 FRG1DP-201ENST00000635586 771 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 AL079305.1-201ENST00000623159 3008 ntBASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.18□□□□□ -1.9
RHBDD3Q9Y3P4 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC092326.2-201ENST00000624772 1561 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 RN7SKP227-201ENST00000364445 330 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 RNU6-339P-201ENST00000384310 107 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 Y_RNA.493-201ENST00000384422 102 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 RPL32P23-201ENST00000397237 405 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AIMP1P1-201ENST00000418670 937 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 SDCBPP2-201ENST00000424643 885 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 RPL7P2-201ENST00000427639 268 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC114973.1-201ENST00000429057 632 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC010881.1-201ENST00000433830 235 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC099563.1-201ENST00000456086 418 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC084357.1-201ENST00000473404 255 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 RN7SL132P-201ENST00000478131 296 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 ACTG1P13-201ENST00000486987 1043 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 RPL23AP73-201ENST00000492507 471 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 HMGB3P14-201ENST00000494195 599 ntBASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RHBDD3Q9Y3P4 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms