Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC017002.4-201ENST00000604721 1525 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 VTRNA1-3-201ENST00000365645 89 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 MIR9-1-201ENST00000385198 89 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC018630.1-201ENST00000541376 925 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 KLKP1-201ENST00000595979 403 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 WISP1-OT1-201ENST00000602893 642 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AL022393.1-201ENST00000625142 1677 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 IPO8P1-201ENST00000455509 3109 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC093311.1-201ENST00000506586 2021 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 RNU1-17P-201ENST00000363022 152 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AL139039.1-201ENST00000401900 692 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC012123.2-201ENST00000485809 248 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 UBTFL10-201ENST00000528532 562 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AL049874.4-201ENST00000557593 255 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC103988.1-201ENST00000566382 2177 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 RPS26P47-201ENST00000427219 348 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 ATP5F1P1-201ENST00000433775 569 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 RPS26P15-201ENST00000488067 348 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC104454.1-201ENST00000421341 1401 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 Y_RNA.274-201ENST00000364714 101 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 UBE2V1P5-201ENST00000440070 405 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AL359715.5-201ENST00000623431 443 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 MFSD8-245ENST00000641743 948 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 CDC27P2-201ENST00000425026 1922 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 MTND5P3-201ENST00000438536 1800 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC010329.2-201ENST00000595195 2737 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 RPL12P26-201ENST00000452430 487 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 Y_RNA.644-201ENST00000459006 113 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC069499.1-201ENST00000489433 509 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 FCF1P8-201ENST00000510322 597 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 uc_338.1-201ENST00000612113 180 ntBASIC1.25□□□□□ -2.21
MACF1Q9UPN3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
MACF1Q9UPN3 SNORA5.1-201ENST00000384275 131 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 RNU6-35P-201ENST00000384530 107 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 MIR592-201ENST00000384959 97 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 TRIM60P13-201ENST00000432350 1283 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 AC092013.1-201ENST00000438795 332 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 DUXAP6-201ENST00000553858 601 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 Z82195.1-201ENST00000604558 398 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 AL162233.1-201ENST00000620014 944 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 MTND5P16-201ENST00000460269 1703 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 AC123912.3-201ENST00000600907 1367 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
MACF1Q9UPN3 AC000367.1-201ENST00000452711 1766 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 RNA5SP453-201ENST00000362503 119 ntBASIC1.24□□□□□ -2.21
MACF1Q9UPN3 Y_RNA.488-201ENST00000384403 102 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms