Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AP003122.4-201ENST00000530980 758 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AL157394.1-201ENST00000562983 1224 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 FGF7P1-201ENST00000582820 288 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC110743.1-201ENST00000584870 478 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC008752.3-201ENST00000588113 712 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC006116.3-201ENST00000592968 361 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC103792.1-201ENST00000603591 919 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC090948.2-201ENST00000607363 564 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 SDR42E1P1-201ENST00000611327 477 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 AC104118.1-201ENST00000607625 1589 ntBASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PPARGC1AQ9UBK2 THAP12P4-201ENST00000528321 2266 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 CCT4P2-201ENST00000233836 1548 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 DDX18P3-201ENST00000404856 2007 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC008033.1-201ENST00000216407 1162 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 SNURFL-201ENST00000309296 343 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC019155.1-201ENST00000382242 574 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 DHFRP6-201ENST00000401776 268 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 RN7SKP114-201ENST00000410327 279 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 EIF4A1P3-201ENST00000411521 244 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 BX295541.1-201ENST00000417774 250 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AL358176.3-201ENST00000420757 454 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC245054.1-201ENST00000420944 258 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 RPEP2-201ENST00000432149 701 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AL358934.1-201ENST00000432346 324 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 MTCYBP45-201ENST00000435243 565 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 YWHAZP8-201ENST00000436935 731 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 CBX1P1-201ENST00000440184 427 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 RPL17P49-201ENST00000443728 411 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 CYCSP24-201ENST00000445119 316 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 DPPA3P1-201ENST00000448050 469 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC079448.1-201ENST00000449377 373 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 MTCO3P20-201ENST00000454926 688 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 RN7SL214P-201ENST00000487317 265 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 RPL35P6-201ENST00000490024 372 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 MTCYBP18-201ENST00000501056 747 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC046134.1-201ENST00000514454 666 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 Y_RNA.672-201ENST00000516289 104 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 RN7SKP260-201ENST00000516907 149 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC092490.3-201ENST00000545370 572 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AL390208.1-201ENST00000605885 644 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 RNU6-87P-201ENST00000607561 108 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 MIR1321-201ENST00000637766 79 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 MAPK10-304ENST00000641341 3984 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AL022578.1-201ENST00000439330 1433 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AC000374.1-201ENST00000434698 1745 ntBASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PPARGC1AQ9UBK2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 Y_RNA.1-201ENST00000352915 104 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 Y_RNA.70-201ENST00000362886 110 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 RNU1-106P-201ENST00000384382 164 ntBASIC5.27□□□□□ -1.57
PPARGC1AQ9UBK2 EIF5P1-201ENST00000400019 1231 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms