Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC104685.1-201ENST00000502445 371 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 TMEM251P1-201ENST00000503717 318 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC109458.1-201ENST00000508858 316 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC239860.2-201ENST00000525886 270 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.16□□□□□ -1.42
USP35Q9P2H5 OR6C73P-201ENST00000546432 358 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.16□□□□□ -1.42
USP35Q9P2H5 CYCSP40-201ENST00000575927 294 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 MIR5186-201ENST00000577504 120 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.16□□□□□ -1.42
USP35Q9P2H5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.16□□□□□ -1.42
USP35Q9P2H5 VN1R90P-201ENST00000595717 726 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC124312.4-201ENST00000605533 310 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 VIS1.1-201ENST00000610517 203 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 AL607023.1-201ENST00000620045 248 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC112200.1-201ENST00000625015 234 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP35Q9P2H5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP35Q9P2H5 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP35Q9P2H5 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.16□□□□□ -1.42
USP35Q9P2H5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP35Q9P2H5 AC009643.2-201ENST00000603543 1448 ntBASIC6.16□□□□□ -1.42
USP35Q9P2H5 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP35Q9P2H5 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP35Q9P2H5 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP35Q9P2H5 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP35Q9P2H5 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP35Q9P2H5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 OR5H2-201ENST00000355273 945 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 MIR372-201ENST00000362225 67 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 RNU6-878P-201ENST00000384578 110 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 AL022722.2-201ENST00000402519 180 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 LAP3P1-201ENST00000403648 294 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 RNU4-72P-201ENST00000410754 173 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 AL365203.2-201ENST00000423444 196 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 AL593851.1-201ENST00000426171 157 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 SETD6P1-201ENST00000444575 317 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 AL162388.1-201ENST00000450912 352 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 SNORD108-201ENST00000459332 71 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 RN7SL132P-201ENST00000478131 296 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 AP002812.1-201ENST00000495378 474 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 PARP4P3-201ENST00000510265 317 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 HMGB3P13-201ENST00000511263 607 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 RN7SKP116-201ENST00000516902 319 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 RNA5SP143-201ENST00000516936 115 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 RNU1-45P-201ENST00000517191 141 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 AP003730.1-201ENST00000524605 285 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 AP003385.6-201ENST00000531603 374 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP35Q9P2H5 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 U73479.1-201ENST00000618062 168 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 AC018816.2-201ENST00000621460 353 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 MIR3653-201ENST00000625572 110 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 AC010300.1-201ENST00000600671 5134 ntBASIC6.15□□□□□ -1.42
USP35Q9P2H5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.15□□□□□ -1.42
USP35Q9P2H5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.15□□□□□ -1.43
USP35Q9P2H5 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC6.15□□□□□ -1.43
USP35Q9P2H5 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.15□□□□□ -1.43
USP35Q9P2H5 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC6.15□□□□□ -1.43
USP35Q9P2H5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USP35Q9P2H5 AC097504.1-201ENST00000515103 2415 ntBASIC6.15□□□□□ -1.43
USP35Q9P2H5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP35Q9P2H5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
USP35Q9P2H5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP35Q9P2H5 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP35Q9P2H5 SNORA62.3-201ENST00000365110 153 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 MIR124-3-201ENST00000384866 87 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 MIR195-201ENST00000385194 87 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 SNORD96B-201ENST00000386148 79 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 Z98745.1-201ENST00000402553 494 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.14□□□□□ -1.43
USP35Q9P2H5 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.14□□□□□ -1.43
USP35Q9P2H5 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.14□□□□□ -1.43
USP35Q9P2H5 AC234781.2-201ENST00000426370 994 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 AC092162.1-201ENST00000432828 434 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC6.14□□□□□ -1.43
USP35Q9P2H5 UBE2D3P1-201ENST00000436669 444 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 AL591503.2-201ENST00000442314 1005 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.14□□□□□ -1.43
USP35Q9P2H5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.14□□□□□ -1.43
USP35Q9P2H5 RN7SL98P-201ENST00000462271 300 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.14□□□□□ -1.43
USP35Q9P2H5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC6.14□□□□□ -1.43
USP35Q9P2H5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC6.14□□□□□ -1.43
USP35Q9P2H5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms