Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NIFKP8-201ENST00000560500 874 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 MIR4330-201ENST00000579077 105 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD248Q9HCU0 AC060780.3-201ENST00000589464 80 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.2□□□□□ -1.58
CD248Q9HCU0 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.2□□□□□ -1.58
CD248Q9HCU0 RNF138P2-201ENST00000603490 592 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 SNORD91B-202ENST00000608459 222 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 AL020991.1-201ENST00000612314 373 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 AL592295.2-201ENST00000612578 206 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 AC243654.2-201ENST00000612843 443 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.2□□□□□ -1.58
CD248Q9HCU0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.2□□□□□ -1.58
CD248Q9HCU0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC5.2□□□□□ -1.58
CD248Q9HCU0 AP006248.2-201ENST00000623309 592 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 MIR6863-201ENST00000636112 90 ntBASIC5.2□□□□□ -1.58
CD248Q9HCU0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.2□□□□□ -1.58
CD248Q9HCU0 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CD248Q9HCU0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD248Q9HCU0 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CD248Q9HCU0 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CD248Q9HCU0 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 RNU4-73P-201ENST00000363164 141 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 Y_RNA.356-201ENST00000365475 113 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 RNU6-297P-201ENST00000384636 107 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 MTCYBP36-201ENST00000404146 440 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 MIR1302-11-201ENST00000408051 138 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 MIR1302-9-201ENST00000408365 138 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 MIR1302-10-201ENST00000408734 138 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 AL590139.1-201ENST00000416267 400 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 C1DP2-201ENST00000418167 426 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 SEPT7P5-201ENST00000434048 306 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC011753.3-201ENST00000443436 406 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC073587.1-201ENST00000447093 876 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 AP000797.1-201ENST00000478870 387 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 COX6B1P5-201ENST00000509843 249 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 RN7SKP260-201ENST00000516907 149 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 MIR3671-201ENST00000580455 88 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 YWHAQP7-201ENST00000603536 658 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 MIR1302-2-201ENST00000607096 138 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 AL672167.1-203ENST00000641299 2975 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 AL022578.1-201ENST00000439330 1433 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 Z99496.1-201ENST00000469424 1477 ntBASIC5.19□□□□□ -1.58
CD248Q9HCU0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CD248Q9HCU0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CD248Q9HCU0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD248Q9HCU0 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CD248Q9HCU0 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CD248Q9HCU0 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.18□□□□□ -1.58
CD248Q9HCU0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD248Q9HCU0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.18□□□□□ -1.58
CD248Q9HCU0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CD248Q9HCU0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CD248Q9HCU0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD248Q9HCU0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CD248Q9HCU0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CD248Q9HCU0 RPL21P132-201ENST00000331267 462 ntBASIC5.18□□□□□ -1.58
CD248Q9HCU0 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CD248Q9HCU0 Y_RNA.295-201ENST00000364918 102 ntBASIC5.18□□□□□ -1.58
CD248Q9HCU0 Y_RNA.548-201ENST00000384656 105 ntBASIC5.18□□□□□ -1.58
CD248Q9HCU0 SNORA40.3-201ENST00000390964 122 ntBASIC5.18□□□□□ -1.58
CD248Q9HCU0 MTCO3P40-201ENST00000392516 676 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms