Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.77□□□□□ -1.97
CHD8Q9HCK8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.77□□□□□ -1.97
CHD8Q9HCK8 SNORD91B-202ENST00000608459 222 ntBASIC2.77□□□□□ -1.97
CHD8Q9HCK8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CHD8Q9HCK8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHD8Q9HCK8 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 SNORD114-1-201ENST00000362705 72 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AL592148.1-201ENST00000413568 445 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 RPS26P47-201ENST00000427219 348 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AC004057.1-201ENST00000485827 348 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 RPS26P15-201ENST00000488067 348 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AP005137.2-201ENST00000609238 400 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AC004866.2-201ENST00000438285 481 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 METTL15P1-201ENST00000481421 1045 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 AC117522.3-201ENST00000507974 584 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 RN7SKP209-201ENST00000516888 304 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.76□□□□□ -1.97
CHD8Q9HCK8 MIR7154-201ENST00000620673 73 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 KPNA2P2-201ENST00000419546 1489 ntBASIC2.76□□□□□ -1.97
CHD8Q9HCK8 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 MIR27B-201ENST00000385129 97 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 RNA5SP21-201ENST00000410917 96 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 AC009963.1-201ENST00000417265 157 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 HMGN1P33-201ENST00000432945 451 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 RPL5P13-201ENST00000462840 709 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 AC108078.2-201ENST00000510750 236 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 RNA5SP148-201ENST00000516527 94 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 HMGB3P22-202ENST00000451823 572 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 AC026979.4-201ENST00000606555 645 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 AC104237.2-201ENST00000612456 443 ntBASIC2.75□□□□□ -1.97
CHD8Q9HCK8 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
CHD8Q9HCK8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 RNY1-201ENST00000364228 113 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 RNU6-283P-201ENST00000364788 107 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 NIPA2P5-201ENST00000452282 464 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 DEFB109F-201ENST00000491870 277 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 USP9YP2-201ENST00000504503 1000 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 USP9YP1-201ENST00000513521 1002 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 NR1H5P-201ENST00000452683 1377 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 ARL4AP3-201ENST00000441452 574 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 RN7SKP96-201ENST00000516948 297 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 AC138965.3-201ENST00000623875 498 ntBASIC2.74□□□□□ -1.97
CHD8Q9HCK8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.74□□□□□ -1.97
CHD8Q9HCK8 RPS21P8-201ENST00000413365 247 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 RPS3AP50-201ENST00000487064 803 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC138938.1-201ENST00000515431 782 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AP001646.1-201ENST00000527936 915 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC009948.4-201ENST00000604692 675 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 AC106730.3-201ENST00000624568 641 ntBASIC2.73□□□□□ -1.97
CHD8Q9HCK8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CHD8Q9HCK8 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms