Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 OFD1P18Y-201ENST00000420889 959 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 ARF4P2-201ENST00000430209 526 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AL158071.1-201ENST00000430315 461 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 RPS3AP46-201ENST00000448352 682 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 U3.44-201ENST00000458938 192 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC004801.2-202ENST00000463559 283 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 RN7SL594P-201ENST00000470590 287 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 OR52A4P-202ENST00000481634 799 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC068587.1-201ENST00000483613 781 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 PCBP2P3-201ENST00000509726 843 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 HIGD1AP10-201ENST00000527837 282 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC010735.1-201ENST00000567305 1026 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC022069.1-201ENST00000582910 658 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 BNIP3P38-201ENST00000601117 544 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC016542.1-201ENST00000608259 493 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AL391497.1-201ENST00000608671 547 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AC245100.7-201ENST00000609678 442 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AL353746.1-201ENST00000566293 6881 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AL355578.1-201ENST00000607405 1328 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 RNU6-441P-201ENST00000384545 106 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 RNU6-837P-201ENST00000391056 108 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC008173.1-201ENST00000418901 264 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC096632.1-201ENST00000427395 310 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 snoU13.3-201ENST00000459441 104 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 RPL21P104-201ENST00000464143 478 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC091959.2-201ENST00000477363 321 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 FCF1P3-201ENST00000496394 590 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC092593.2-201ENST00000513866 913 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 RNU6-1102P-201ENST00000516149 96 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 MIR4425-201ENST00000580572 84 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC005412.1-201ENST00000580812 1049 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 ZNF92P2-201ENST00000600543 1059 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AL590282.1-201ENST00000610379 1136 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AL592295.2-201ENST00000612578 206 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC008121.2-201ENST00000614647 523 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC006213.5-201ENST00000619673 288 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 AC008432.1-201ENST00000615912 1320 ntBASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
LRRC40Q9H9A6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 RNU1-85P-201ENST00000364127 164 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 RNA5SP51-201ENST00000364750 119 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 SNORA57.1-201ENST00000391227 145 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 PTMAP5-201ENST00000393073 333 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AL590704.1-201ENST00000402856 794 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AL583834.1-201ENST00000406943 343 ntBASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.6□□□□□ -1.83
LRRC40Q9H9A6 AC068533.1-201ENST00000418542 415 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms