Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 TOMM20P1-201ENST00000534518 427 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 SULT1C2P2-201ENST00000562517 294 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 OR1E3-201ENST00000575608 948 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AL499605.1-201ENST00000604628 403 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AC022893.3-201ENST00000607665 437 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AC090425.1-201ENST00000610007 140 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AC133104.2-201ENST00000615272 193 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 FAM27E2-201ENST00000619668 403 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 RMST_9.1-201ENST00000619945 193 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AP001052.1-201ENST00000626421 99 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AC073488.3-201ENST00000631611 778 ntBASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BHLHE41Q9C0J9 AL359922.3-201ENST00000624779 1670 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC066616.2-201ENST00000559334 1481 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC012254.3-201ENST00000591183 2117 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AL606537.1-201ENST00000607258 2011 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 RPL32P3-201ENST00000359025 275 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AL136372.1-201ENST00000403060 228 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 RN7SKP279-201ENST00000411383 298 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 BX323014.1-201ENST00000412876 237 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 MTCYBP10-201ENST00000424905 650 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC005019.1-201ENST00000436455 431 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC092013.1-201ENST00000438795 332 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 RPL21P133-201ENST00000443666 476 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC011225.1-201ENST00000457751 369 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 RN7SL254P-201ENST00000460609 284 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC025164.1-201ENST00000496249 478 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 TRBVA-201ENST00000498804 316 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC098591.2-201ENST00000510152 315 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AP000857.1-201ENST00000532151 543 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC087588.2-201ENST00000617667 426 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AL713922.2-201ENST00000619384 716 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC073488.6-201ENST00000632293 754 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 AC119674.1-207ENST00000641355 633 ntBASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
BHLHE41Q9C0J9 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
BHLHE41Q9C0J9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.59□□□□□ -1.52
BHLHE41Q9C0J9 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
BHLHE41Q9C0J9 AC091046.3-201ENST00000631455 1574 ntBASIC5.59□□□□□ -1.52
BHLHE41Q9C0J9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
BHLHE41Q9C0J9 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 MTND4P1-201ENST00000457501 1466 ntBASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 AL442639.1-201ENST00000625030 1899 ntBASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BHLHE41Q9C0J9 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms