Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 DSTNP4-201ENST00000399472 474 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 ATP5F1P6-201ENST00000402768 767 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AL159169.1-201ENST00000421119 127 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC241520.1-201ENST00000422654 1099 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 GOT2P5-201ENST00000433995 546 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC002542.1-201ENST00000440683 193 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 MTND1P33-201ENST00000446251 917 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AL590399.6-201ENST00000446396 307 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC073387.1-201ENST00000453261 709 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 U3.44-201ENST00000458938 192 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC015724.1-201ENST00000478577 156 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 SETP6-201ENST00000479329 568 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC106707.2-201ENST00000484182 374 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 HMGN1P15-201ENST00000513870 295 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 U4.6-201ENST00000621618 127 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AL034408.1-202ENST00000636088 415 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AC009093.8-201ENST00000641769 292 ntBASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
CCSER1Q9C0I3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 RNA5SP119-201ENST00000362715 117 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 MIR23B-201ENST00000384832 97 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AL355379.1-201ENST00000405542 640 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AL158050.1-201ENST00000416077 457 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AP000907.1-201ENST00000428428 510 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AC091286.1-201ENST00000431233 461 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 RPL17P35-201ENST00000432217 549 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 HMGN2P7-201ENST00000456186 273 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 RPL7L1P8-201ENST00000469911 741 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AP000893.1-201ENST00000474462 794 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AP000563.1-201ENST00000490865 758 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AC078817.1-201ENST00000492623 435 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AC020893.1-201ENST00000502452 580 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AC112518.2-201ENST00000508565 425 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 MTCO1P30-201ENST00000515244 580 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AF279873.1-201ENST00000523393 313 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 TGIF1P1-201ENST00000558095 802 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 MTCYBP28-201ENST00000566728 1132 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 MIR4425-201ENST00000580572 84 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AC007687.1-201ENST00000602704 304 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 RNVU1-4-201ENST00000612985 164 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 U73479.1-201ENST00000618062 168 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AP006248.3-201ENST00000623580 594 ntBASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCSER1Q9C0I3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC073055.1-201ENST00000456901 1621 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AL049781.1-201ENST00000623195 3585 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 AC016716.1-201ENST00000265882 708 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 SNORA71.3-201ENST00000362582 128 ntBASIC3.92□□□□□ -1.78
CCSER1Q9C0I3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms