Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RPL23AP41-201ENST00000484754 458 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 RPL23AP72-201ENST00000492447 435 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 NIPA2P2-201ENST00000496376 1083 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 RPS17P5-201ENST00000498293 408 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC079075.1-201ENST00000559543 878 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AL355375.2-201ENST00000574825 175 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC007687.1-201ENST00000602704 304 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC022106.2-201ENST00000620114 757 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 MTND5P33-201ENST00000571250 1450 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AL353796.1-201ENST00000561542 3241 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 AC010329.2-201ENST00000595195 2737 ntBASIC5.17□□□□□ -1.58
PTCHD1Q96NR3 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC130650.2-201ENST00000618736 2403 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 NACAP2-201ENST00000318548 624 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RPL7P26-201ENST00000333817 754 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RNA5SP234-201ENST00000363916 119 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.326-201ENST00000365176 113 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 Y_RNA.419-201ENST00000384041 102 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RNU6-1293P-201ENST00000384077 107 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 MIR1-2-201ENST00000384961 85 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RN7SKP229-201ENST00000410465 302 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AL353678.1-201ENST00000422735 741 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 MTCO3P46-201ENST00000425787 232 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AL590233.1-201ENST00000430017 456 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 NDUFA5P4-201ENST00000436704 385 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 SPRYD7P1-201ENST00000443861 570 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AZGP1P2-201ENST00000454506 345 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AL133445.1-201ENST00000467051 452 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC233702.1-201ENST00000482905 502 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC026427.2-201ENST00000506228 536 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 GLUD1P3-202ENST00000508551 200 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RNU7-30P-201ENST00000516835 62 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RNA5SP337-201ENST00000517007 109 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 IGKV2-18-201ENST00000522607 343 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AP003072.1-201ENST00000531740 145 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC023050.3-201ENST00000541142 333 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC007225.2-201ENST00000562529 256 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC010525.2-201ENST00000590920 195 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 YWHAQP7-201ENST00000603536 658 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC006363.1-201ENST00000603806 463 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 uc_338.5-201ENST00000611839 155 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AC109309.2-201ENST00000612597 332 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 AL354950.2-201ENST00000617939 290 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 RNU6-156P-201ENST00000621869 107 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 MIR1302-1-201ENST00000637932 143 ntBASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTCHD1Q96NR3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms