Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC108078.3-201ENST00000502633 489 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC021146.5-201ENST00000503544 545 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 SNORA64.4-201ENST00000516632 81 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 RN7SKP277-201ENST00000516895 283 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC008562.1-201ENST00000521763 330 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC005242.1-201ENST00000585658 438 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC245128.3-201ENST00000594721 748 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AC048347.1-201ENST00000624621 427 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 AL592494.2-201ENST00000425455 1548 ntBASIC3.47□□□□□ -1.85
C9orf72Q96LT7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.47□□□□□ -1.85
C9orf72Q96LT7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
C9orf72Q96LT7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
C9orf72Q96LT7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 MFSD8-233ENST00000641482 4860 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 RNA5SP50-201ENST00000363731 107 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 RNU6-1293P-201ENST00000384077 107 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 BX890604.2-201ENST00000427883 474 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 HMGB3P11-201ENST00000440127 604 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 U3.44-201ENST00000458938 192 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 PLGLA-201ENST00000465668 449 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 WBP1LP4-201ENST00000505043 344 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC074250.1-201ENST00000511117 192 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 RN7SKP283-201ENST00000517197 270 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 MTND2P26-201ENST00000528255 1029 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC004923.2-201ENST00000529649 369 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 OR5D17P-201ENST00000531492 978 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC006518.1-201ENST00000541449 943 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 CENPUP2-201ENST00000555897 1186 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC005412.1-201ENST00000580812 1049 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC009948.4-201ENST00000604692 675 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AL159169.3-201ENST00000608871 561 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 RNU6-156P-201ENST00000621869 107 ntBASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.46□□□□□ -1.86
C9orf72Q96LT7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 SNORA31-201ENST00000362607 130 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 RNA5SP197-201ENST00000363357 119 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 SNORD56.3-201ENST00000363507 71 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 RNA5SP189-201ENST00000364920 115 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 RNU6-761P-201ENST00000384148 107 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 RSL24D1P1-201ENST00000404972 493 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 RNU2-21P-201ENST00000410368 188 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AC245291.1-201ENST00000419501 328 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 CKS1BP5-201ENST00000434172 273 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 ISCA1P2-201ENST00000438679 421 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 RBMY2UP-201ENST00000453474 324 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AC078918.1-201ENST00000498515 228 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AC093755.1-201ENST00000512950 1023 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 RNU4-60P-201ENST00000517239 135 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 RN7SKP289-201ENST00000517244 295 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 OR8L1P-201ENST00000534005 955 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AC007458.1-201ENST00000542812 373 ntBASIC3.45□□□□□ -1.86
C9orf72Q96LT7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.45□□□□□ -1.86
C9orf72Q96LT7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms