Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 GNG5P2-201ENST00000372054 207 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 SUGT1P1-201ENST00000379514 476 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 Y_RNA.462-201ENST00000384268 102 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 Y_RNA.493-201ENST00000384422 102 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 Y_RNA.496-201ENST00000384444 101 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AL034403.1-201ENST00000399414 885 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AP000275.1-201ENST00000411943 390 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 RPL23AP27-201ENST00000415161 451 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 UQCRBP1-201ENST00000421129 336 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 EIF4EP1-201ENST00000422311 642 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 YWHAZP8-201ENST00000436935 731 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AL772161.1-201ENST00000439130 476 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 SLC31A1P1-201ENST00000451221 567 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 RNU7-66P-201ENST00000459469 62 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 Y_RNA.673-201ENST00000516306 88 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 RNU6-566P-201ENST00000516790 107 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AC025260.1-201ENST00000548858 430 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AC006557.5-201ENST00000603126 811 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 OR10AB1P-201ENST00000609613 938 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 Mico1.1-201ENST00000611698 204 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AL669831.3-213ENST00000636676 183 ntBASIC6.76□□□□□ -1.33
TRIM47Q96LD4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TRIM47Q96LD4 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 SRRM1P3-201ENST00000426911 2678 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC007159.1-201ENST00000566529 4706 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 Y_RNA.152-201ENST00000363578 100 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 RNU6-522P-201ENST00000364497 107 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 RNU6-619P-201ENST00000365146 108 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 RHOT1P2-201ENST00000366423 333 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 RNU6-890P-201ENST00000384121 107 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 Y_RNA.464-201ENST00000384282 110 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 Y_RNA.482-201ENST00000384377 111 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 Y_RNA.506-201ENST00000384494 102 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 MIR1-2-201ENST00000384961 85 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 MT-TW-201ENST00000387382 68 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AL078604.1-201ENST00000404609 466 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 BTBD10P2-201ENST00000404779 676 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 COX6CP17-201ENST00000421389 185 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AP001324.1-201ENST00000428553 399 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 GPR143P-201ENST00000434155 205 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC105402.2-201ENST00000438503 358 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AL356010.1-201ENST00000456364 102 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 RN7SL172P-201ENST00000460535 303 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 RPL39P38-201ENST00000467018 153 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 FO393415.2-201ENST00000480085 343 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 HMGB1P35-201ENST00000503360 598 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC116655.1-201ENST00000508324 901 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC103843.2-201ENST00000530523 682 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 GNAI2P1-201ENST00000541815 315 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC123904.2-201ENST00000548059 300 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 HMGN2P6-201ENST00000551091 273 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC010547.7-201ENST00000570323 333 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.75□□□□□ -1.33
TRIM47Q96LD4 EIF3FP1-201ENST00000613970 806 ntBASIC6.75□□□□□ -1.33
TRIM47Q96LD4 AC127459.3-201ENST00000624328 466 ntBASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms