Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RPL7L1P11-201ENST00000446092 721 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AL122020.1-201ENST00000472287 459 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 RN7SL826P-201ENST00000479724 288 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AC011005.2-201ENST00000487324 359 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-CQ95604 AC026784.1-201ENST00000507986 352 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 BX510359.5-201ENST00000515651 304 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 RNU2-69P-201ENST00000516061 100 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 HIGD1AP5-201ENST00000529959 259 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AC040926.1-201ENST00000530195 238 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 RPA2P3-201ENST00000533268 770 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-CQ95604 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.57□□□□□ -1.36
HLA-CQ95604 AC096772.1-201ENST00000609146 564 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 MIR6809-201ENST00000612189 116 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 RNU6-156P-201ENST00000621869 107 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 AC091903.1-201ENST00000624322 454 ntBASIC6.57□□□□□ -1.36
HLA-CQ95604 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HLA-CQ95604 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-CQ95604 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.57□□□□□ -1.36
HLA-CQ95604 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HLA-CQ95604 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HLA-CQ95604 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-CQ95604 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-CQ95604 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
HLA-CQ95604 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-CQ95604 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-CQ95604 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HLA-CQ95604 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HLA-CQ95604 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
HLA-CQ95604 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-CQ95604 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-CQ95604 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-CQ95604 RN7SKP115-201ENST00000363177 317 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 Y_RNA.483-201ENST00000384380 101 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 RNU6-754P-201ENST00000391166 107 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 RNU6-516P-201ENST00000411381 104 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 RPL21P109-201ENST00000422213 475 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 MRPS18CP6-201ENST00000423587 223 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AL591704.1-201ENST00000432574 275 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-CQ95604 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-CQ95604 AC022431.1-201ENST00000450941 438 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-CQ95604 RPL9P32-201ENST00000464118 620 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AL133445.1-201ENST00000467051 452 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AC117503.1-201ENST00000472241 394 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 RN7SL705P-201ENST00000481678 294 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-CQ95604 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-CQ95604 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-CQ95604 TBCAP3-201ENST00000512475 312 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-CQ95604 CDH12P4-201ENST00000517835 295 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 CDH12P3-201ENST00000517935 295 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 CDH12P1-201ENST00000518435 295 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-CQ95604 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-CQ95604 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.56□□□□□ -1.36
HLA-CQ95604 MIR4505-201ENST00000582238 73 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-CQ95604 AC010463.3-201ENST00000594077 500 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-CQ95604 AL359547.2-201ENST00000615810 418 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.56□□□□□ -1.36
HLA-CQ95604 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-CQ95604 SPATA31C2-201ENST00000324915 3777 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AC132219.2-201ENST00000624416 2327 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HLA-CQ95604 AC093278.2-201ENST00000564956 2485 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.56□□□□□ -1.36
HLA-CQ95604 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HLA-CQ95604 SOCS5P3-201ENST00000425115 1576 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HLA-CQ95604 SMG1P7-201ENST00000565246 2704 ntBASIC6.56□□□□□ -1.36
HLA-CQ95604 AC008669.1-201ENST00000565823 2178 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-CQ95604 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-CQ95604 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.55□□□□□ -1.36
HLA-CQ95604 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.55□□□□□ -1.36
HLA-CQ95604 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
HLA-CQ95604 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HLA-CQ95604 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HLA-CQ95604 Y_RNA.376-201ENST00000365638 108 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 Y_RNA.577-201ENST00000384794 101 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 UBE2V1P4-201ENST00000425374 344 ntBASIC6.55□□□□□ -1.36
HLA-CQ95604 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms