Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.63□□□□□ -1.99
USP9XQ93008 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.63□□□□□ -1.99
USP9XQ93008 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USP9XQ93008 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USP9XQ93008 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.63□□□□□ -1.99
USP9XQ93008 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USP9XQ93008 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.63□□□□□ -1.99
USP9XQ93008 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC2.63□□□□□ -1.99
USP9XQ93008 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC2.63□□□□□ -1.99
USP9XQ93008 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USP9XQ93008 MOB1AP2-201ENST00000446060 614 ntBASIC2.63□□□□□ -1.99
USP9XQ93008 GAPDHP39-201ENST00000481866 979 ntBASIC2.63□□□□□ -1.99
USP9XQ93008 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.63□□□□□ -1.99
USP9XQ93008 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.63□□□□□ -1.99
USP9XQ93008 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USP9XQ93008 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
USP9XQ93008 AC006840.1-201ENST00000623069 542 ntBASIC2.63□□□□□ -1.99
USP9XQ93008 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
USP9XQ93008 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.63□□□□□ -1.99
USP9XQ93008 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
USP9XQ93008 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.62□□□□□ -1.99
USP9XQ93008 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
USP9XQ93008 SEPT14P1-201ENST00000458703 648 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 AP001025.2-201ENST00000490908 477 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 AC092436.1-201ENST00000506450 503 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 RNU1-143P-201ENST00000516296 146 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 RNA5SP490-201ENST00000517141 136 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 U1.23-201ENST00000610293 146 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 RNU1-68P-201ENST00000615382 146 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 AC022509.4-201ENST00000621404 572 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 U1.39-201ENST00000621562 146 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 PLCE1P1-201ENST00000622094 305 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC2.62□□□□□ -1.99
USP9XQ93008 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USP9XQ93008 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
USP9XQ93008 AC005332.5-201ENST00000591222 2919 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.62□□□□□ -1.99
USP9XQ93008 RPL31P45-201ENST00000419532 356 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 AL137014.1-201ENST00000420490 1226 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.62□□□□□ -1.99
USP9XQ93008 AL451074.3-201ENST00000437709 472 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.62□□□□□ -1.99
USP9XQ93008 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.62□□□□□ -1.99
USP9XQ93008 RFPL4AP3-201ENST00000515267 345 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 SCARNA20.6-201ENST00000517251 106 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 AC011602.1-201ENST00000546484 331 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 MIR5047-201ENST00000579212 100 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP9XQ93008 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.62□□□□□ -1.99
USP9XQ93008 AC009948.4-201ENST00000604692 675 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 AC025034.2-201ENST00000623264 286 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 PISRT1-201ENST00000626175 531 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.62□□□□□ -1.99
USP9XQ93008 AC108206.1-201ENST00000570186 4159 ntBASIC2.62□□□□□ -1.99
USP9XQ93008 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.62□□□□□ -1.99
USP9XQ93008 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.61□□□□□ -1.99
USP9XQ93008 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USP9XQ93008 RPL21P132-201ENST00000331267 462 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 NPM1P24-201ENST00000428039 894 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.61□□□□□ -1.99
USP9XQ93008 ELOCP8-201ENST00000439309 332 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 ELOCP15-201ENST00000442090 332 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.61□□□□□ -1.99
USP9XQ93008 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.61□□□□□ -1.99
USP9XQ93008 SEC11B-201ENST00000518383 499 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 DNAJC19P3-201ENST00000594491 331 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 AC008638.3-201ENST00000603341 463 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 AP004247.3-201ENST00000608682 624 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 MIR4727-201ENST00000622232 55 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 AC009487.2-201ENST00000420969 6821 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
USP9XQ93008 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
USP9XQ93008 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USP9XQ93008 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.61□□□□□ -1.99
USP9XQ93008 RNA5SP213-201ENST00000391031 106 ntBASIC2.61□□□□□ -1.99
USP9XQ93008 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.61□□□□□ -1.99
USP9XQ93008 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.61□□□□□ -1.99
USP9XQ93008 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.61□□□□□ -1.99
USP9XQ93008 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.61□□□□□ -1.99
USP9XQ93008 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.61□□□□□ -1.99
USP9XQ93008 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
USP9XQ93008 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.61□□□□□ -1.99
USP9XQ93008 RNU4-53P-201ENST00000410828 140 ntBASIC2.6□□□□□ -1.99
USP9XQ93008 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.6□□□□□ -1.99
USP9XQ93008 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.6□□□□□ -1.99
USP9XQ93008 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.6□□□□□ -1.99
USP9XQ93008 AL645937.1-202ENST00000421799 937 ntBASIC2.6□□□□□ -1.99
USP9XQ93008 AL121882.1-201ENST00000422893 417 ntBASIC2.6□□□□□ -1.99
USP9XQ93008 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.6□□□□□ -1.99
USP9XQ93008 HMGN1P33-201ENST00000432945 451 ntBASIC2.6□□□□□ -1.99
USP9XQ93008 SKP1P1-201ENST00000438081 489 ntBASIC2.6□□□□□ -1.99
USP9XQ93008 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.6□□□□□ -1.99
USP9XQ93008 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
USP9XQ93008 AC117522.3-201ENST00000507974 584 ntBASIC2.6□□□□□ -1.99
USP9XQ93008 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.6□□□□□ -1.99
USP9XQ93008 PRELID3BP8-201ENST00000604148 295 ntBASIC2.6□□□□□ -1.99
USP9XQ93008 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.6□□□□□ -1.99
USP9XQ93008 AL158062.1-201ENST00000619632 745 ntBASIC2.6□□□□□ -1.99
USP9XQ93008 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.6□□□□□ -1.99
USP9XQ93008 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms