Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 RNA5SP197-201ENST00000363357 119 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 RNU6-152P-201ENST00000384037 107 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 PRRC2CP1-201ENST00000404428 159 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 RPL7P29-201ENST00000437151 728 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 NOTCH2P1-201ENST00000443481 624 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AP002345.1-201ENST00000456493 928 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC089999.1-201ENST00000460336 374 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC010401.1-201ENST00000463867 348 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 RPS4XP22-201ENST00000480755 780 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC093770.1-201ENST00000511559 571 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC107934.2-201ENST00000518653 310 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 MED28P5-201ENST00000528254 438 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC084824.1-201ENST00000550917 1005 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 OR4H12P-201ENST00000556269 907 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 MTCO3P24-201ENST00000572729 782 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC006116.10-201ENST00000591836 581 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC084036.1-201ENST00000609190 508 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC024941.1-201ENST00000612250 334 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AL645937.1-201ENST00000641739 1652 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 AC032011.1-201ENST00000611703 1549 ntBASIC3.29□□□□□ -1.88
CLHC1Q8NHS4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 SAGE4P-201ENST00000442271 3381 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 RNA5SP124-201ENST00000362739 110 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 RNU1-64P-201ENST00000365443 163 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 RPL21P17-201ENST00000397467 475 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 DHFRP5-201ENST00000406944 564 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AL356968.1-201ENST00000416622 474 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 RPL23AP82-202ENST00000427528 469 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AL035407.2-201ENST00000454090 378 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 RPL6P9-201ENST00000466502 859 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AC091959.2-201ENST00000477363 321 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 HMGB1P3-201ENST00000502802 616 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AC104619.4-201ENST00000510773 249 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 MTND4LP31-201ENST00000514859 294 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 RNU6-711P-201ENST00000517255 106 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AC005972.3-201ENST00000606304 481 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 AL121772.2-201ENST00000614331 297 ntBASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.28□□□□□ -1.88
CLHC1Q8NHS4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AC103988.1-201ENST00000566382 2177 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AL359837.1-201ENST00000381357 287 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 RNU6-629P-201ENST00000384061 103 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 RNU4-74P-201ENST00000411280 161 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 CYCSP19-201ENST00000411715 316 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AC109780.2-201ENST00000413467 845 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AC126124.2-201ENST00000413542 321 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 HSPE1P1-201ENST00000421494 318 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 GLRXP1-201ENST00000423261 334 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 AP000907.1-201ENST00000428428 510 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 RPS7P2-201ENST00000435134 607 ntBASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.27□□□□□ -1.89
CLHC1Q8NHS4 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms