Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC084035.1-201ENST00000634543 607 ntBASIC2.45□□□□□ -2.02
NUP35Q8NFH5 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NUP35Q8NFH5 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 MIR372-201ENST00000362225 67 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 RNA5SP119-201ENST00000362715 117 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 RNA5SP197-201ENST00000363357 119 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 RNU6-628P-201ENST00000410675 107 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 Z77249.1-201ENST00000444622 1175 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 GAPDHP36-201ENST00000480688 918 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 CEACAMP10-202ENST00000495431 496 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC010460.1-201ENST00000507087 466 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 RNU6-56P-201ENST00000516986 93 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC019227.1-201ENST00000526902 510 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AL121594.4-201ENST00000556211 1196 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 BNIP3P5-201ENST00000562290 498 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC010615.3-201ENST00000597319 394 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 MIR6748-201ENST00000610433 71 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC131902.3-201ENST00000611767 581 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 MIR378J-201ENST00000611988 109 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AL356321.1-201ENST00000621360 228 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC073348.1-201ENST00000623002 331 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC090897.3-201ENST00000636973 1157 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC002546.1-201ENST00000588041 2504 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC108206.1-201ENST00000570186 4159 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AL645937.1-201ENST00000641739 1652 ntBASIC2.44□□□□□ -2.02
NUP35Q8NFH5 AC116096.1-201ENST00000566804 2314 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 SNORD9-201ENST00000362566 104 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 RNA5SP283-201ENST00000365604 119 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AC068538.1-201ENST00000376856 336 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 MIR1250-201ENST00000408098 113 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 OR4C10P-201ENST00000434991 931 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 ARL5AP3-201ENST00000439327 386 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 H2AFZP6-201ENST00000444403 394 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 PLGLA-201ENST00000465668 449 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AC104472.2-201ENST00000469035 601 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 RN7SKP43-201ENST00000516173 320 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 RNA5SP468-201ENST00000516782 93 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 EIF4EP5-201ENST00000528228 640 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 MIR4286-201ENST00000580651 93 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AC006116.10-201ENST00000591836 581 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AC008962.1-201ENST00000605729 304 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AP005212.4-201ENST00000614206 710 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AC083809.1-201ENST00000615051 472 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 ZYXP1-201ENST00000617638 118 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 AC009950.2-201ENST00000636548 183 ntBASIC2.43□□□□□ -2.02
NUP35Q8NFH5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP35Q8NFH5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms