Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC107027.3-201ENST00000565095 3473 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 SMIM11P1-201ENST00000369586 178 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AL583834.1-201ENST00000406943 343 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC093106.2-201ENST00000428212 385 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 SNX18P26-201ENST00000458433 740 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC044810.1-201ENST00000480271 711 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 OR10G5P-201ENST00000532733 358 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC107958.1-201ENST00000556576 290 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC002310.3-201ENST00000569728 723 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC233702.7-202ENST00000582941 211 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 DUSP12P1-201ENST00000612874 516 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 Z69720.2-201ENST00000624755 279 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 MIR4496-201ENST00000635896 61 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC119674.1-207ENST00000641355 633 ntBASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 SHQ1P1-201ENST00000437111 1544 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 OR52B3P-201ENST00000314715 928 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 Y_RNA.80-201ENST00000362996 102 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 RNU6-249P-201ENST00000363016 102 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 Y_RNA.193-201ENST00000363979 102 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 RNA5SP152-201ENST00000365184 110 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 Y_RNA.463-201ENST00000384271 102 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 RNU6-434P-201ENST00000384376 107 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 SNORD70.1-201ENST00000391007 85 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 CYB5AP4-201ENST00000396692 399 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC114482.1-201ENST00000418010 247 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC000089.1-201ENST00000424559 801 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 ELOCP18-201ENST00000434209 337 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 LINC00328-2P-201ENST00000436585 219 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC079922.1-201ENST00000443291 359 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 RPL31P11-202ENST00000454082 372 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 RN7SL189P-201ENST00000468631 289 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 RN7SL790P-201ENST00000474043 298 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC015911.1-201ENST00000495111 156 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 MTND4LP22-201ENST00000508209 276 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 Y_RNA.708-201ENST00000516950 96 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6□□□□□ -1.45
DEPDC4Q8N2C3 GSTP1P1-201ENST00000548078 319 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 AC010653.1-201ENST00000571108 881 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 MIR4420-201ENST00000583944 77 ntBASIC6□□□□□ -1.45
DEPDC4Q8N2C3 MIR5692C1-201ENST00000585309 91 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms