Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 HMGB2P1-201ENST00000591146 634 ntBASIC5.25□□□□□ -1.57
SYNE4Q8N205 AL606490.9-201ENST00000603331 271 ntBASIC5.25□□□□□ -1.57
SYNE4Q8N205 AP000238.1-201ENST00000608759 426 ntBASIC5.25□□□□□ -1.57
SYNE4Q8N205 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SYNE4Q8N205 AC138393.1-206ENST00000540997 1886 ntBASIC5.25□□□□□ -1.57
SYNE4Q8N205 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SYNE4Q8N205 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.25□□□□□ -1.57
SYNE4Q8N205 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SYNE4Q8N205 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 AC004520.1-201ENST00000608362 1413 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SYNE4Q8N205 Y_RNA.88-201ENST00000363029 99 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 RNU6-931P-201ENST00000363850 107 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 RNU6-560P-201ENST00000364007 108 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 RNU6-729P-201ENST00000384399 107 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 MIR449B-201ENST00000384995 97 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 MIR483-201ENST00000385070 76 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 TPT1P2-201ENST00000413105 503 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 CYCSP10-201ENST00000417973 294 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SYNE4Q8N205 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 AL133547.1-201ENST00000448546 220 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 CFTRP1-201ENST00000456646 183 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 RNA5SP246-201ENST00000458909 119 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 RPL7P18-201ENST00000478965 734 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 RPS29P19-201ENST00000479709 171 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SYNE4Q8N205 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 AC010587.2-201ENST00000511727 448 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 OR6C7P-201ENST00000547875 934 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 AC084757.1-201ENST00000559987 490 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 AL606834.2-201ENST00000602954 668 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.24□□□□□ -1.57
SYNE4Q8N205 AC131235.4-201ENST00000609288 620 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 AL353726.1-201ENST00000614041 1000 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 MFSD8-245ENST00000641743 948 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 AC093311.1-201ENST00000506586 2021 ntBASIC5.24□□□□□ -1.57
SYNE4Q8N205 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SYNE4Q8N205 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SYNE4Q8N205 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 AL592182.3-201ENST00000642132 3304 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 RNU1-44P-201ENST00000384453 163 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 RNA5SP80-201ENST00000410475 111 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 OR5AW1P-201ENST00000426334 1006 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 HMGB1P45-201ENST00000435986 653 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC009263.1-201ENST00000441193 1239 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 SUMO2P2-201ENST00000456482 255 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC138853.1-201ENST00000503549 823 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 HNRNPKP5-201ENST00000515300 253 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 RNU6-1178P-201ENST00000516674 107 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 EEF1B2P4-201ENST00000551398 348 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC044913.1-201ENST00000557200 430 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC136619.2-201ENST00000563361 631 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 MIR548S-201ENST00000581352 82 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC103881.1-201ENST00000603476 538 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC112230.1-201ENST00000604342 547 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC090525.3-201ENST00000605601 189 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC007684.1-201ENST00000609671 477 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AL008636.1-201ENST00000625038 1018 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 PCMTD1P7-201ENST00000634506 357 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC116618.1-201ENST00000634617 774 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE4Q8N205 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE4Q8N205 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SYNE4Q8N205 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SYNE4Q8N205 AC097461.1-201ENST00000568928 2821 ntBASIC5.23□□□□□ -1.57
SYNE4Q8N205 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE4Q8N205 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SYNE4Q8N205 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms