Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 IGHV1-14-201ENST00000523391 241 ntBASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 AL589674.2-201ENST00000604304 337 ntBASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 AC010424.2-201ENST00000607594 443 ntBASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 OLMALINC-203ENST00000641087 3779 ntBASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 AC018765.1-201ENST00000623357 3446 ntBASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 AC011369.2-201ENST00000624423 1567 ntBASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 AC090017.1-201ENST00000548612 1779 ntBASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
NPAS3Q8IXF0 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 DDX18P3-201ENST00000404856 2007 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AL161901.1-201ENST00000624954 3425 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 Y_RNA.314-201ENST00000365114 102 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 Y_RNA.518-201ENST00000384552 113 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 Y_RNA.577-201ENST00000384794 101 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 MIR506-201ENST00000384998 124 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 MIR454-201ENST00000390180 115 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 RNU6-952P-201ENST00000391164 108 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 RPL7P60-201ENST00000397636 735 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 OR3A2-201ENST00000408891 1076 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 NDUFB1P2-201ENST00000449477 176 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AL118520.1-201ENST00000450770 291 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AL049714.1-201ENST00000466686 347 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AC083795.1-201ENST00000491760 320 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 RNU6-62P-201ENST00000516526 102 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AP006587.4-201ENST00000526053 529 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AP003733.2-201ENST00000529409 171 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AP002392.1-201ENST00000537692 208 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AC090502.2-201ENST00000549267 280 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AL356432.3-201ENST00000568952 465 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 OR7E18P-201ENST00000592589 702 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 HDAC1P2-201ENST00000453661 1398 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 ZNF285B-201ENST00000561698 1767 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AL442639.1-201ENST00000625030 1899 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AC244517.1-201ENST00000606030 2086 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AC007998.4-201ENST00000612496 2533 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AL022323.4-201ENST00000623980 13120 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 AL122126.1-201ENST00000546905 1318 ntBASIC6.25□□□□□ -1.41
NPAS3Q8IXF0 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 RNU6-853P-201ENST00000364306 107 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 Y_RNA.269-201ENST00000364685 89 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 RNU6-44P-201ENST00000384045 107 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 SNORA22C-201ENST00000384614 134 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 MIR1298-201ENST00000408783 112 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 RNU2-28P-201ENST00000410457 189 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 AC126120.1-201ENST00000431082 470 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 TXNP5-201ENST00000441043 315 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 AL450996.1-201ENST00000445574 1202 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 RPL31P44-201ENST00000447680 377 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 AC111193.1-201ENST00000504097 155 ntBASIC6.24□□□□□ -1.41
NPAS3Q8IXF0 RNA5SP116-201ENST00000516132 98 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms