Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 MIR16-2-201ENST00000362117 81 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 RNU6-805P-201ENST00000365643 106 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC068538.1-201ENST00000376856 336 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 SNORA51.12-201ENST00000384448 134 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AP000567.1-201ENST00000406413 156 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 RSL24D1P6-201ENST00000426934 401 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC097262.1-201ENST00000452559 548 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC093267.1-201ENST00000489176 961 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC021146.5-201ENST00000503544 545 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 MTND2P31-201ENST00000512602 616 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 RANP9-201ENST00000519957 271 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC006518.1-201ENST00000541449 943 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC005972.3-201ENST00000606304 481 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 AC132825.7-201ENST00000638744 335 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 MFSD8-233ENST00000641482 4860 ntBASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NUDCD3Q8IVD9 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 RNA5SP383-201ENST00000362934 120 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 RNU6-481P-201ENST00000384194 107 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 RNU1-13P-201ENST00000384499 162 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 MIR607-201ENST00000385241 96 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 BTBD10P2-201ENST00000404779 676 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 RAB28P1-201ENST00000411517 641 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC126124.2-201ENST00000413542 321 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC008173.1-201ENST00000418901 264 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 OR51AB1P-201ENST00000429046 620 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AL590103.1-201ENST00000434488 307 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC125238.1-201ENST00000448842 249 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 RPL7P55-201ENST00000450522 746 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AP002884.2-201ENST00000471647 395 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 RPL23AP44-201ENST00000482216 473 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC016065.2-201ENST00000514530 444 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC104027.1-201ENST00000521887 300 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AF279873.1-201ENST00000523393 313 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC010198.2-201ENST00000550612 259 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 SYF2P1-201ENST00000550658 413 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 VN1R9P-201ENST00000614184 867 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 ZYXP1-201ENST00000617638 118 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 U4.6-201ENST00000621618 127 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 PLCE1P1-201ENST00000622094 305 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 SNORA50A-202ENST00000629536 136 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AL356118.1-201ENST00000635272 1078 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 MIR4496-201ENST00000635896 61 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC032011.1-201ENST00000611703 1549 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 AC024341.1-201ENST00000526444 1552 ntBASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NUDCD3Q8IVD9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC107081.3-201ENST00000612715 2034 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 RNA5SP283-201ENST00000365604 119 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 RPL32P23-201ENST00000397237 405 ntBASIC3.41□□□□□ -1.86
NUDCD3Q8IVD9 ATP5F1P6-201ENST00000402768 767 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms