Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 BTF3P13-201ENST00000513224 490 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AC114781.4-201ENST00000513707 639 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 FAM92A1P1-201ENST00000528023 890 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 LARP7P2-201ENST00000575306 125 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 MIR4472-2-201ENST00000582069 67 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 PRPF19P1-201ENST00000584766 898 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AL353997.4-201ENST00000586196 166 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 HMGN1P30-201ENST00000589286 268 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 BBIP1P1-201ENST00000602999 279 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 RPL23AP92-201ENST00000603609 255 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AC011626.1-201ENST00000604710 562 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 MTND5P28-201ENST00000438005 1594 ntBASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
RUFY4Q6ZNE9 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 Y_RNA.1-201ENST00000352915 104 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 RPS20P2-201ENST00000402520 389 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 RPL7P25-201ENST00000404151 721 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AL024474.1-201ENST00000404655 591 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AL358934.1-201ENST00000432346 324 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 MTND4LP16-201ENST00000440828 295 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC002381.1-201ENST00000447049 280 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC079448.1-201ENST00000449377 373 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 ELOCP23-201ENST00000452014 332 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 BX322784.1-201ENST00000455793 1077 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC245028.2-201ENST00000458673 253 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC087312.1-201ENST00000471411 480 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 RBM43P1-201ENST00000476891 1081 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 RPL35P6-201ENST00000490024 372 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 RPS27AP18-201ENST00000515536 459 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 SNORA20.3-201ENST00000516880 132 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 RN7SKP260-201ENST00000516907 149 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC021006.3-201ENST00000530771 192 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC008752.3-201ENST00000588113 712 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC011487.3-201ENST00000593607 453 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AL365503.1-201ENST00000605247 905 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AP005432.2-201ENST00000608162 586 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 uc_338.18-201ENST00000615451 175 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 MIR1321-201ENST00000637766 79 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AC011978.2-201ENST00000569835 2054 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 THAP12P5-201ENST00000405864 2275 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 SCARNA15-201ENST00000607520 4325 ntBASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.69□□□□□ -1.5
RUFY4Q6ZNE9 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms