Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 RPL7P53-201ENST00000421245 739 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 MTCO2P25-201ENST00000447065 681 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AL136126.1-201ENST00000473603 402 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC092451.1-201ENST00000480211 153 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 RNU6-1225P-201ENST00000516336 65 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 IGHV3-32-201ENST00000519182 355 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC105233.3-201ENST00000531125 744 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC109635.4-202ENST00000531666 412 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 CYCSP29-201ENST00000533731 318 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AL139286.1-201ENST00000604465 483 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 HMGB1P50-201ENST00000605814 607 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC092650.2-201ENST00000619984 902 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC103858.2-201ENST00000621471 543 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AP005264.7-201ENST00000625003 745 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 LARP1BP1-201ENST00000506036 1359 ntBASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.7□□□□□ -1.82
NHLRC1Q6VVB1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 USP8P1-201ENST00000494673 3183 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 NACA3P-201ENST00000359690 648 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 RNU6-216P-201ENST00000363282 104 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 RNU6-263P-201ENST00000363811 107 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 RPL21P66-201ENST00000426566 466 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 COX6B1P7-201ENST00000430845 235 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 KCTD10P1-201ENST00000434203 625 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC092427.1-201ENST00000439177 601 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC006011.1-201ENST00000442758 349 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC104164.3-201ENST00000467363 1258 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC108475.1-201ENST00000507880 950 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AL389895.1-201ENST00000554127 252 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC022655.2-201ENST00000577280 318 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC114878.2-201ENST00000604863 1251 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC055876.5-201ENST00000605667 259 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC080013.4-201ENST00000607624 649 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AL590282.1-201ENST00000610379 1136 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 AC022960.3-201ENST00000619794 441 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 MIR8059-201ENST00000620427 81 ntBASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NHLRC1Q6VVB1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 RNU6-1249P-201ENST00000363237 111 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 RNA5SP322-201ENST00000363617 119 ntBASIC3.68□□□□□ -1.82
NHLRC1Q6VVB1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms