Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 RPL23AP16-201ENST00000441715 421 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 ELOCP13-201ENST00000443934 329 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 HMGN2P7-201ENST00000456186 273 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC010301.1-201ENST00000473936 355 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC084198.1-201ENST00000477747 402 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC015908.1-201ENST00000478739 476 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 GAPDHP39-201ENST00000481866 979 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC010460.1-201ENST00000507087 466 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 RN7SKP83-201ENST00000516512 178 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 RN7SKP209-201ENST00000516888 304 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 snoZ278.1-201ENST00000517059 112 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC008802.1-201ENST00000519121 791 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 SUMO2P20-201ENST00000520803 283 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AP000790.1-201ENST00000528891 737 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 YPEL5P3-201ENST00000547227 352 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC023825.1-201ENST00000566704 1030 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 MIR4286-201ENST00000580651 93 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC015726.1-201ENST00000602353 681 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC067959.1-201ENST00000604334 379 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC110741.2-201ENST00000605278 268 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC099785.1-201ENST00000605697 437 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AL512506.2-201ENST00000624472 458 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 AC111188.2-201ENST00000529697 1387 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NIPAL3Q6P499 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.47□□□□□ -1.85
NIPAL3Q6P499 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.46□□□□□ -1.85
NIPAL3Q6P499 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 RNU6-761P-201ENST00000384148 107 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 RNU6-1181P-201ENST00000384191 106 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 MIR199A2-201ENST00000385289 110 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AL603865.2-201ENST00000401679 213 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 PPIAP31-201ENST00000405422 495 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 RN7SKP263-201ENST00000411194 309 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC069282.1-201ENST00000411911 526 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 FCF1P2-201ENST00000415284 583 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC093698.1-201ENST00000423843 571 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 MTCYBP32-201ENST00000427945 1084 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AL365396.1-201ENST00000430854 671 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC239367.2-201ENST00000447309 705 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 HMGN1P5-201ENST00000448591 263 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AL034418.1-201ENST00000448675 860 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 MTCO3P2-201ENST00000457365 171 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AL136126.1-201ENST00000473603 402 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC106872.2-201ENST00000494303 480 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 NDUFB4P9-201ENST00000511646 388 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 RN7SKP244-201ENST00000516513 307 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC023632.1-201ENST00000518463 375 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AP003066.2-201ENST00000529375 555 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC044913.1-201ENST00000557200 430 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 MIR4666A-201ENST00000580160 79 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AP003973.1-201ENST00000604639 691 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AL137849.1-201ENST00000604767 169 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AP005137.2-201ENST00000609238 400 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC073530.2-201ENST00000623987 261 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AC130650.2-201ENST00000618736 2403 ntBASIC3.46□□□□□ -1.86
NIPAL3Q6P499 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.46□□□□□ -1.86
NIPAL3Q6P499 AL136520.1-201ENST00000600311 1322 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AP001350.1-201ENST00000601906 1524 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 MIR423-201ENST00000362201 94 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 RPL31P1-201ENST00000398116 372 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AL138878.1-201ENST00000405131 347 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AL583834.1-201ENST00000406943 343 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms