Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 RNU5E-5P-201ENST00000365379 116 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 RNU4-34P-201ENST00000410431 124 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC127526.1-201ENST00000417526 366 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC096638.2-201ENST00000434965 711 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 SKP1P1-201ENST00000438081 489 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 GDI2P2-201ENST00000445131 608 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AL592447.1-201ENST00000447592 540 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 SNRPFP4-201ENST00000456366 242 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 PRELID3BP7-201ENST00000503606 469 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC010350.1-201ENST00000504908 231 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC006390.1-201ENST00000508068 283 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 RFPL1S-203ENST00000539579 330 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC011447.4-201ENST00000587562 111 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 TPMTP1-201ENST00000592307 737 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC012557.2-201ENST00000605919 418 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 MIR6768-201ENST00000610734 72 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AP002505.2-201ENST00000623585 696 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AP001784.1-201ENST00000624107 428 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC092656.1-203ENST00000624134 423 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 AC027287.1-201ENST00000553115 1453 ntBASIC4.61□□□□□ -1.67
RNF220Q5VTB9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
RNF220Q5VTB9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 RNU6-263P-201ENST00000363811 107 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 RNA5SP435-201ENST00000364044 108 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 RNA5SP513-201ENST00000364648 118 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 SNORD116-4-201ENST00000384733 96 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AL391361.1-201ENST00000405580 489 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 RN7SKP206-201ENST00000410823 293 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 RNU4-78P-201ENST00000410940 126 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC006366.1-201ENST00000422002 759 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AL513174.1-201ENST00000423182 629 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 MTND1P28-201ENST00000435623 950 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 OR7E125P-201ENST00000443450 846 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 BTF3P5-201ENST00000457252 467 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 snoU13.3-201ENST00000459441 104 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 RPS26P28-201ENST00000470806 348 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 UBA52P7-201ENST00000486088 380 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 CBX3P3-201ENST00000508108 532 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC106872.4-201ENST00000510050 523 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 FABP5P5-201ENST00000515537 406 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 RNU6-714P-201ENST00000516963 103 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC069240.1-201ENST00000548774 375 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AL121834.1-201ENST00000572284 509 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 MIR548AB-201ENST00000584917 84 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AL451044.1-201ENST00000604867 238 ntBASIC4.6□□□□□ -1.67
RNF220Q5VTB9 AC004853.1-201ENST00000604902 698 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 384.5 ms