Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.03□□□□□ -1.76
GABPAQ06546 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 OR1AA1P-201ENST00000419597 916 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AC241520.1-201ENST00000422654 1099 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AC009263.1-201ENST00000441193 1239 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 RPS29P31-201ENST00000446147 164 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 HMGB3P21-201ENST00000452483 547 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.03□□□□□ -1.76
GABPAQ06546 MTND2P39-201ENST00000457230 764 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AC010307.1-201ENST00000467206 836 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 RPL21P18-201ENST00000469899 480 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.03□□□□□ -1.76
GABPAQ06546 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GABPAQ06546 FCF1P8-201ENST00000510322 597 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.03□□□□□ -1.76
GABPAQ06546 AC008494.2-201ENST00000514544 370 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.03□□□□□ -1.76
GABPAQ06546 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.03□□□□□ -1.76
GABPAQ06546 OR4A2P-201ENST00000527276 913 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.03□□□□□ -1.76
GABPAQ06546 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.03□□□□□ -1.76
GABPAQ06546 CYB5AP5-201ENST00000549779 389 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AC023824.3-201ENST00000569003 562 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.03□□□□□ -1.76
GABPAQ06546 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.03□□□□□ -1.76
GABPAQ06546 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.03□□□□□ -1.76
GABPAQ06546 DNAJC19P3-201ENST00000594491 331 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 OR6R2P-201ENST00000609216 300 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.03□□□□□ -1.76
GABPAQ06546 AC022149.2-201ENST00000621061 203 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.03□□□□□ -1.76
GABPAQ06546 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
GABPAQ06546 AC032011.1-201ENST00000611703 1549 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GABPAQ06546 CR381670.1-201ENST00000624291 1693 ntBASIC4.03□□□□□ -1.76
GABPAQ06546 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.03□□□□□ -1.76
GABPAQ06546 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
GABPAQ06546 MAPK10-373ENST00000641983 6772 ntBASIC4.03□□□□□ -1.77
GABPAQ06546 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.77
GABPAQ06546 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GABPAQ06546 ZNF849P-201ENST00000594711 1566 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GABPAQ06546 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.02□□□□□ -1.77
GABPAQ06546 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
GABPAQ06546 RNA5SP322-201ENST00000363617 119 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
GABPAQ06546 RNU6-468P-201ENST00000384003 109 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 RNU6-207P-201ENST00000384137 107 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 HNRNPDP2-201ENST00000406475 478 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.02□□□□□ -1.77
GABPAQ06546 AC013262.1-201ENST00000426710 252 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 RPS26P40-201ENST00000435209 294 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.02□□□□□ -1.77
GABPAQ06546 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.02□□□□□ -1.77
GABPAQ06546 AC105402.2-201ENST00000438503 358 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 Z75741.1-201ENST00000446793 314 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 NDUFS5P3-201ENST00000450668 321 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.02□□□□□ -1.77
GABPAQ06546 AC096992.1-201ENST00000459808 709 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 S100A11P1-201ENST00000477525 312 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 RPS3AP50-201ENST00000487064 803 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 RPL7L1P13-201ENST00000511702 739 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 RN7SKP57-201ENST00000517248 293 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.02□□□□□ -1.77
GABPAQ06546 AC104115.2-201ENST00000523026 687 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 AC084757.1-201ENST00000559987 490 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
GABPAQ06546 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.02□□□□□ -1.77
GABPAQ06546 AC020914.4-201ENST00000597690 277 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.02□□□□□ -1.77
GABPAQ06546 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.02□□□□□ -1.77
GABPAQ06546 AL359715.5-201ENST00000623431 443 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.02□□□□□ -1.77
GABPAQ06546 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GABPAQ06546 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GABPAQ06546 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GABPAQ06546 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
GABPAQ06546 AC073055.1-201ENST00000456901 1621 ntBASIC4.02□□□□□ -1.77
GABPAQ06546 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GABPAQ06546 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GABPAQ06546 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
GABPAQ06546 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
GABPAQ06546 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GABPAQ06546 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
GABPAQ06546 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.01□□□□□ -1.77
GABPAQ06546 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.01□□□□□ -1.77
GABPAQ06546 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.01□□□□□ -1.77
GABPAQ06546 RNA5SP197-201ENST00000363357 119 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 RNA5SP391-201ENST00000363456 119 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 MIR483-201ENST00000385070 76 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 RN7SKP56-201ENST00000410513 331 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 RPF2P1-201ENST00000424137 906 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.01□□□□□ -1.77
GABPAQ06546 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.01□□□□□ -1.77
GABPAQ06546 HMGB1P16-201ENST00000447155 540 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 AL133477.1-201ENST00000457472 514 ntBASIC4.01□□□□□ -1.77
GABPAQ06546 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.01□□□□□ -1.77
GABPAQ06546 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms