Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 AC127537.2-201ENST00000439258 465 ntBASIC3.34□□□□□ -1.87
GTF2BQ00403 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.34□□□□□ -1.87
GTF2BQ00403 VN1R48P-201ENST00000448149 1036 ntBASIC3.34□□□□□ -1.87
GTF2BQ00403 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.34□□□□□ -1.87
GTF2BQ00403 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.34□□□□□ -1.87
GTF2BQ00403 RPL23AP44-201ENST00000482216 473 ntBASIC3.34□□□□□ -1.87
GTF2BQ00403 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.34□□□□□ -1.87
GTF2BQ00403 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.34□□□□□ -1.87
GTF2BQ00403 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.34□□□□□ -1.87
GTF2BQ00403 AC008083.2-201ENST00000546707 476 ntBASIC3.34□□□□□ -1.87
GTF2BQ00403 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.34□□□□□ -1.87
GTF2BQ00403 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.34□□□□□ -1.87
GTF2BQ00403 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.34□□□□□ -1.87
GTF2BQ00403 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.34□□□□□ -1.87
GTF2BQ00403 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.34□□□□□ -1.87
GTF2BQ00403 BNIP3P22-201ENST00000593399 556 ntBASIC3.34□□□□□ -1.87
GTF2BQ00403 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.34□□□□□ -1.87
GTF2BQ00403 AC139713.2-210ENST00000641741 992 ntBASIC3.34□□□□□ -1.87
GTF2BQ00403 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
GTF2BQ00403 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
GTF2BQ00403 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 AC000367.1-201ENST00000452711 1766 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 SNORA46-201ENST00000384762 135 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 AIMP1P1-201ENST00000418670 937 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.33□□□□□ -1.88
GTF2BQ00403 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.33□□□□□ -1.88
GTF2BQ00403 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.33□□□□□ -1.88
GTF2BQ00403 AC017015.1-201ENST00000477387 286 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.33□□□□□ -1.88
GTF2BQ00403 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
GTF2BQ00403 TXNP6-201ENST00000510190 310 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 RNU6-1308P-201ENST00000516817 103 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.33□□□□□ -1.88
GTF2BQ00403 AC068657.1-201ENST00000520807 306 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
GTF2BQ00403 MTND5P21-201ENST00000531961 522 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.33□□□□□ -1.88
GTF2BQ00403 AL161713.1-201ENST00000555538 145 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.33□□□□□ -1.88
GTF2BQ00403 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.33□□□□□ -1.88
GTF2BQ00403 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 ZNF542P-204ENST00000482727 1305 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 AC004972.1-201ENST00000623934 2209 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
GTF2BQ00403 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.33□□□□□ -1.88
GTF2BQ00403 AL118496.1-201ENST00000440201 1812 ntBASIC3.33□□□□□ -1.88
GTF2BQ00403 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
GTF2BQ00403 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
GTF2BQ00403 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
GTF2BQ00403 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
GTF2BQ00403 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2BQ00403 SNORA71.1-201ENST00000364523 117 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.32□□□□□ -1.88
GTF2BQ00403 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.32□□□□□ -1.88
GTF2BQ00403 MTND4P11-201ENST00000417020 1058 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF2BQ00403 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF2BQ00403 RPS3AP12-201ENST00000443616 753 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AL353898.1-201ENST00000444055 238 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AL671855.1-201ENST00000446875 1203 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 TVP23BP2-201ENST00000455082 615 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2BQ00403 AP001992.1-205ENST00000462248 379 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AC117440.1-201ENST00000474107 571 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AC093278.1-201ENST00000494700 600 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AC012170.1-201ENST00000495139 359 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AC023050.1-201ENST00000498198 304 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF2BQ00403 AC114967.1-201ENST00000504890 259 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF2BQ00403 AC021146.7-201ENST00000509604 775 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF2BQ00403 SNORA70.24-201ENST00000517233 118 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.32□□□□□ -1.88
GTF2BQ00403 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2BQ00403 HIGD1AP10-201ENST00000527837 282 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.32□□□□□ -1.88
GTF2BQ00403 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2BQ00403 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.32□□□□□ -1.88
GTF2BQ00403 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2BQ00403 AP003117.1-201ENST00000602771 554 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AL161756.2-201ENST00000604597 246 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 AL137246.1-201ENST00000607072 977 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2BQ00403 AC007318.2-201ENST00000620999 243 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2BQ00403 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.32□□□□□ -1.88
GTF2BQ00403 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
GTF2BQ00403 AL592494.2-201ENST00000425455 1548 ntBASIC3.32□□□□□ -1.88
GTF2BQ00403 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
GTF2BQ00403 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.31□□□□□ -1.88
GTF2BQ00403 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms