Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.04□□□□□ -2.08
PRKDCP78527 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.04□□□□□ -2.08
PRKDCP78527 ACTG1P13-201ENST00000486987 1043 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.04□□□□□ -2.08
PRKDCP78527 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.04□□□□□ -2.08
PRKDCP78527 MIR5047-201ENST00000579212 100 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.04□□□□□ -2.08
PRKDCP78527 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
PRKDCP78527 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PRKDCP78527 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC2.04□□□□□ -2.08
PRKDCP78527 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.04□□□□□ -2.08
PRKDCP78527 RPL21P99-201ENST00000480369 423 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 AC116337.1-201ENST00000509680 687 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 RPL7P20-201ENST00000520308 745 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 UBTFL10-201ENST00000528532 562 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 AC073476.4-201ENST00000628409 72 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 AC019072.1-201ENST00000604535 1551 ntBASIC2.04□□□□□ -2.08
PRKDCP78527 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.04□□□□□ -2.08
PRKDCP78527 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PRKDCP78527 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PRKDCP78527 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
PRKDCP78527 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC2.03□□□□□ -2.08
PRKDCP78527 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.03□□□□□ -2.08
PRKDCP78527 HMGB1P48-201ENST00000446155 598 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 SYT14P1-201ENST00000481459 721 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 RNA5SP282-201ENST00000516355 108 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 AC022884.3-201ENST00000579571 248 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 uc_338.32-201ENST00000615087 172 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PRKDCP78527 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.03□□□□□ -2.08
PRKDCP78527 AL158062.1-201ENST00000619632 745 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PRKDCP78527 OR10AB1P-202ENST00000641219 1686 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 AC006020.1-201ENST00000420179 1854 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
PRKDCP78527 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PRKDCP78527 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
PRKDCP78527 MIR592-201ENST00000384959 97 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 SCARNA17.1-201ENST00000516211 143 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 SCARNA17.2-201ENST00000516334 143 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.03□□□□□ -2.08
PRKDCP78527 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.03□□□□□ -2.08
PRKDCP78527 SCARNA17.4-201ENST00000614296 143 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PRKDCP78527 DMD-211ENST00000378707 7410 ntTSL 5 BASIC2.03□□□□□ -2.08
PRKDCP78527 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
PRKDCP78527 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
PRKDCP78527 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
PRKDCP78527 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
PRKDCP78527 Y_RNA.269-201ENST00000364685 89 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 SNORA70E-201ENST00000384492 135 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 CYCSP45-201ENST00000402289 315 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.03□□□□□ -2.08
PRKDCP78527 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.03□□□□□ -2.08
PRKDCP78527 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.03□□□□□ -2.08
PRKDCP78527 HMGB1P16-201ENST00000447155 540 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 AL591623.2-201ENST00000449978 222 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 RPS26P3-201ENST00000470205 348 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 TRBV8-2-201ENST00000475637 270 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 AL669942.2-201ENST00000620352 697 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 AL356321.1-201ENST00000621360 228 ntBASIC2.03□□□□□ -2.08
PRKDCP78527 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PRKDCP78527 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC2.03□□□□□ -2.08
PRKDCP78527 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
PRKDCP78527 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.03□□□□□ -2.08
PRKDCP78527 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.09
PRKDCP78527 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.03□□□□□ -2.09
PRKDCP78527 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.03□□□□□ -2.09
PRKDCP78527 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC2.03□□□□□ -2.09
PRKDCP78527 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PRKDCP78527 SNORA25.9-201ENST00000365087 128 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 GLRXP1-201ENST00000423261 334 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC2.02□□□□□ -2.09
PRKDCP78527 AC073587.1-201ENST00000447093 876 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 RPL23AP15-201ENST00000450202 459 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 AC022882.1-201ENST00000532142 501 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.02□□□□□ -2.09
PRKDCP78527 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.02□□□□□ -2.09
PRKDCP78527 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.02□□□□□ -2.09
PRKDCP78527 AP002770.2-201ENST00000543613 532 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.02□□□□□ -2.09
PRKDCP78527 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.02□□□□□ -2.09
PRKDCP78527 AC103968.1-201ENST00000557841 573 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 SULT1C2P2-201ENST00000562517 294 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PRKDCP78527 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PRKDCP78527 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PRKDCP78527 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.02□□□□□ -2.09
PRKDCP78527 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PRKDCP78527 RNU6-316P-201ENST00000391027 107 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.02□□□□□ -2.09
PRKDCP78527 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.02□□□□□ -2.09
PRKDCP78527 AC008716.1-201ENST00000511084 513 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.02□□□□□ -2.09
PRKDCP78527 OR5G4P-201ENST00000525251 760 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 AP003117.2-201ENST00000606010 545 ntBASIC2.02□□□□□ -2.09
PRKDCP78527 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PRKDCP78527 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PRKDCP78527 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PRKDCP78527 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms